Protein–RNA interactions for Protein: Q99698

LYST, Lysosomal-trafficking regulator, humanhuman

Predictions only

Length 3,801 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSTQ99698 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.73
LYSTQ99698 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
LYSTQ99698 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
LYSTQ99698 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
LYSTQ99698 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
LYSTQ99698 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC10.47□□□□□ -0.73
LYSTQ99698 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC10.47□□□□□ -0.73
LYSTQ99698 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC10.47□□□□□ -0.73
LYSTQ99698 OR2K2-202ENST00000374428 1038 ntBASIC10.47□□□□□ -0.73
LYSTQ99698 NPPA-201ENST00000376476 728 ntTSL 3 BASIC10.47□□□□□ -0.73
LYSTQ99698 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC10.47□□□□□ -0.73
LYSTQ99698 RPL3-202ENST00000401609 1289 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
LYSTQ99698 AC004522.1-201ENST00000419978 654 ntBASIC10.47□□□□□ -0.73
LYSTQ99698 AC114763.1-201ENST00000431985 928 ntTSL 2 BASIC10.47□□□□□ -0.73
LYSTQ99698 RN7SL396P-201ENST00000471086 295 ntBASIC10.47□□□□□ -0.73
LYSTQ99698 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC10.47□□□□□ -0.73
LYSTQ99698 IRF3-215ENST00000596822 823 ntTSL 3 BASIC10.47□□□□□ -0.73
LYSTQ99698 AL132780.4-201ENST00000624870 1135 ntBASIC10.47□□□□□ -0.73
LYSTQ99698 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC10.47□□□□□ -0.73
LYSTQ99698 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC10.47□□□□□ -0.73
LYSTQ99698 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
LYSTQ99698 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC10.47□□□□□ -0.73
LYSTQ99698 LINC02537-201ENST00000635943 1367 ntTSL 4 BASIC10.47□□□□□ -0.73
LYSTQ99698 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
LYSTQ99698 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC10.47□□□□□ -0.73
LYSTQ99698 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
LYSTQ99698 AC109460.1-201ENST00000567209 1478 ntTSL 3 BASIC10.47□□□□□ -0.73
LYSTQ99698 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC10.47□□□□□ -0.73
LYSTQ99698 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC10.46□□□□□ -0.73
LYSTQ99698 LINC02447-202ENST00000501888 2146 ntBASIC10.46□□□□□ -0.73
LYSTQ99698 CIDEC-202ENST00000383817 1199 ntAPPRIS ALT1 TSL 1 (best) BASIC10.46□□□□□ -0.73
LYSTQ99698 AP001160.1-201ENST00000535817 565 ntTSL 3 BASIC10.46□□□□□ -0.73
LYSTQ99698 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC10.46□□□□□ -0.73
LYSTQ99698 SLC27A5-204ENST00000594786 643 ntTSL 2 BASIC10.46□□□□□ -0.73
LYSTQ99698 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
LYSTQ99698 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
LYSTQ99698 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.73
LYSTQ99698 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
LYSTQ99698 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
LYSTQ99698 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
LYSTQ99698 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC10.46□□□□□ -0.73
LYSTQ99698 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
LYSTQ99698 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC10.46□□□□□ -0.73
LYSTQ99698 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
LYSTQ99698 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
LYSTQ99698 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC10.46□□□□□ -0.73
LYSTQ99698 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC10.46□□□□□ -0.73
LYSTQ99698 PAUPAR-201ENST00000630360 2965 ntBASIC10.46□□□□□ -0.73
LYSTQ99698 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC10.46□□□□□ -0.73
LYSTQ99698 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC10.46□□□□□ -0.73
LYSTQ99698 AC090616.6-203ENST00000579186 1945 ntBASIC10.46□□□□□ -0.73
LYSTQ99698 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.73
LYSTQ99698 EIF1AD-211ENST00000533544 965 ntAPPRIS P1 TSL 3 BASIC10.46□□□□□ -0.73
LYSTQ99698 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC10.46□□□□□ -0.73
LYSTQ99698 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC10.46□□□□□ -0.73
LYSTQ99698 CTSW-204ENST00000528419 1341 ntTSL 2 BASIC10.46□□□□□ -0.73
LYSTQ99698 E2F3P2-201ENST00000447755 1422 ntBASIC10.46□□□□□ -0.74
LYSTQ99698 VWCE-205ENST00000535710 1437 ntTSL 2 BASIC10.46□□□□□ -0.74
LYSTQ99698 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC10.46□□□□□ -0.74
LYSTQ99698 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
LYSTQ99698 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC10.46□□□□□ -0.74
LYSTQ99698 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
LYSTQ99698 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC10.46□□□□□ -0.74
LYSTQ99698 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
LYSTQ99698 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC10.46□□□□□ -0.74
LYSTQ99698 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
LYSTQ99698 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC10.46□□□□□ -0.74
LYSTQ99698 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC10.46□□□□□ -0.74
LYSTQ99698 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
LYSTQ99698 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC10.46□□□□□ -0.74
LYSTQ99698 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC10.46□□□□□ -0.74
LYSTQ99698 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
LYSTQ99698 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
LYSTQ99698 NDUFAB1P1-201ENST00000404262 460 ntBASIC10.46□□□□□ -0.74
LYSTQ99698 AC134312.2-201ENST00000563521 608 ntTSL 2 BASIC10.46□□□□□ -0.74
LYSTQ99698 MIR3677-201ENST00000578964 60 ntBASIC10.46□□□□□ -0.74
LYSTQ99698 RNASEK-210ENST00000593646 566 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
LYSTQ99698 DDX5-235ENST00000630471 473 ntTSL 4 BASIC10.46□□□□□ -0.74
LYSTQ99698 GPN3-201ENST00000228827 1468 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
LYSTQ99698 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC10.46□□□□□ -0.74
LYSTQ99698 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC10.46□□□□□ -0.74
LYSTQ99698 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC10.46□□□□□ -0.74
LYSTQ99698 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC10.46□□□□□ -0.74
LYSTQ99698 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
LYSTQ99698 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
LYSTQ99698 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.74
LYSTQ99698 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
LYSTQ99698 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC10.46□□□□□ -0.74
LYSTQ99698 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC10.45□□□□□ -0.74
LYSTQ99698 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
LYSTQ99698 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
LYSTQ99698 CHRNA1-203ENST00000409219 1466 ntTSL 3 BASIC10.45□□□□□ -0.74
LYSTQ99698 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
LYSTQ99698 OR1J1-201ENST00000259357 969 ntAPPRIS P1 BASIC10.45□□□□□ -0.74
LYSTQ99698 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
LYSTQ99698 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
LYSTQ99698 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
LYSTQ99698 FCRLB-202ENST00000367944 1172 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
LYSTQ99698 FCRLB-203ENST00000367945 1131 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
LYSTQ99698 AC012213.1-201ENST00000517376 722 ntTSL 3 BASIC10.45□□□□□ -0.74
Retrieved 100 of 98,524 protein–RNA pairs in 58.8 ms