Protein–RNA interactions for Protein: Q96MX3

ZNF48, Zinc finger protein 48, humanhuman

Predicted RBP Predictions only

Length 618 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF48Q96MX3 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
ZNF48Q96MX3 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
ZNF48Q96MX3 AC005229.1-201ENST00000392885 409 ntBASIC12.64□□□□□ -0.39
ZNF48Q96MX3 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
ZNF48Q96MX3 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC12.64□□□□□ -0.39
ZNF48Q96MX3 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
ZNF48Q96MX3 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC12.64□□□□□ -0.39
ZNF48Q96MX3 PACS1-203ENST00000524815 628 ntTSL 4 BASIC12.64□□□□□ -0.39
ZNF48Q96MX3 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC12.64□□□□□ -0.39
ZNF48Q96MX3 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
ZNF48Q96MX3 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC12.64□□□□□ -0.39
ZNF48Q96MX3 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC12.64□□□□□ -0.39
ZNF48Q96MX3 AC005252.2-201ENST00000624630 1141 ntBASIC12.64□□□□□ -0.39
ZNF48Q96MX3 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC12.64□□□□□ -0.39
ZNF48Q96MX3 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC12.64□□□□□ -0.39
ZNF48Q96MX3 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
ZNF48Q96MX3 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
ZNF48Q96MX3 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
ZNF48Q96MX3 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC12.64□□□□□ -0.39
ZNF48Q96MX3 ITGB2-208ENST00000397857 2813 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
ZNF48Q96MX3 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
ZNF48Q96MX3 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
ZNF48Q96MX3 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC12.64□□□□□ -0.39
ZNF48Q96MX3 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC12.64□□□□□ -0.39
ZNF48Q96MX3 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC12.64□□□□□ -0.39
ZNF48Q96MX3 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
ZNF48Q96MX3 LINC02228-204ENST00000642115 2962 ntBASIC12.63□□□□□ -0.39
ZNF48Q96MX3 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC12.63□□□□□ -0.39
ZNF48Q96MX3 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
ZNF48Q96MX3 AL121723.1-201ENST00000445194 1519 ntBASIC12.63□□□□□ -0.39
ZNF48Q96MX3 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
ZNF48Q96MX3 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
ZNF48Q96MX3 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC12.63□□□□□ -0.39
ZNF48Q96MX3 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
ZNF48Q96MX3 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
ZNF48Q96MX3 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC12.63□□□□□ -0.39
ZNF48Q96MX3 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
ZNF48Q96MX3 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC12.63□□□□□ -0.39
ZNF48Q96MX3 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
ZNF48Q96MX3 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
ZNF48Q96MX3 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC12.63□□□□□ -0.39
ZNF48Q96MX3 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC12.63□□□□□ -0.39
ZNF48Q96MX3 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
ZNF48Q96MX3 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
ZNF48Q96MX3 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
ZNF48Q96MX3 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC12.63□□□□□ -0.39
ZNF48Q96MX3 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
ZNF48Q96MX3 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC12.63□□□□□ -0.39
ZNF48Q96MX3 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
ZNF48Q96MX3 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC12.63□□□□□ -0.39
ZNF48Q96MX3 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC12.63□□□□□ -0.39
ZNF48Q96MX3 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC12.63□□□□□ -0.39
ZNF48Q96MX3 USB1-203ENST00000539737 1212 ntTSL 2 BASIC12.63□□□□□ -0.39
ZNF48Q96MX3 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
ZNF48Q96MX3 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC12.63□□□□□ -0.39
ZNF48Q96MX3 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC12.63□□□□□ -0.39
ZNF48Q96MX3 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC12.63□□□□□ -0.39
ZNF48Q96MX3 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC12.63□□□□□ -0.39
ZNF48Q96MX3 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC12.63□□□□□ -0.39
ZNF48Q96MX3 MIR4525-201ENST00000580000 75 ntBASIC12.63□□□□□ -0.39
ZNF48Q96MX3 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC12.63□□□□□ -0.39
ZNF48Q96MX3 GPX4-206ENST00000588919 803 ntTSL 2 BASIC12.63□□□□□ -0.39
ZNF48Q96MX3 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC12.63□□□□□ -0.39
ZNF48Q96MX3 AC000095.1-201ENST00000603208 874 ntBASIC12.63□□□□□ -0.39
ZNF48Q96MX3 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC12.63□□□□□ -0.39
ZNF48Q96MX3 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC12.63□□□□□ -0.39
ZNF48Q96MX3 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC12.63□□□□□ -0.39
ZNF48Q96MX3 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
ZNF48Q96MX3 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC12.63□□□□□ -0.39
ZNF48Q96MX3 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC12.63□□□□□ -0.39
ZNF48Q96MX3 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC12.63□□□□□ -0.39
ZNF48Q96MX3 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
ZNF48Q96MX3 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC12.63□□□□□ -0.39
ZNF48Q96MX3 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
ZNF48Q96MX3 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC12.63□□□□□ -0.39
ZNF48Q96MX3 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
ZNF48Q96MX3 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC12.63□□□□□ -0.39
ZNF48Q96MX3 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
ZNF48Q96MX3 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
ZNF48Q96MX3 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
ZNF48Q96MX3 LOX-206ENST00000639739 1626 ntTSL 5 BASIC12.62□□□□□ -0.39
ZNF48Q96MX3 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
ZNF48Q96MX3 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC12.62□□□□□ -0.39
ZNF48Q96MX3 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
ZNF48Q96MX3 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
ZNF48Q96MX3 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
ZNF48Q96MX3 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
ZNF48Q96MX3 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
ZNF48Q96MX3 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
ZNF48Q96MX3 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
ZNF48Q96MX3 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
ZNF48Q96MX3 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
ZNF48Q96MX3 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
ZNF48Q96MX3 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
ZNF48Q96MX3 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
ZNF48Q96MX3 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
ZNF48Q96MX3 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
ZNF48Q96MX3 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
ZNF48Q96MX3 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
ZNF48Q96MX3 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 95.8 ms