Protein–RNA interactions for Protein: Q96L96

ALPK3, Alpha-protein kinase 3, humanhuman

Predictions only

Length 1,907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALPK3Q96L96 AP005264.3-201ENST00000592370 485 ntTSL 5 BASIC16.41■□□□□ 0.22
ALPK3Q96L96 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
ALPK3Q96L96 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC16.41■□□□□ 0.22
ALPK3Q96L96 MRPL37P1-201ENST00000592451 1337 ntBASIC16.41■□□□□ 0.22
ALPK3Q96L96 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC16.4■□□□□ 0.22
ALPK3Q96L96 FH-201ENST00000366560 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
ALPK3Q96L96 TNRC18P3-201ENST00000441896 2691 ntBASIC16.4■□□□□ 0.22
ALPK3Q96L96 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
ALPK3Q96L96 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
ALPK3Q96L96 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
ALPK3Q96L96 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
ALPK3Q96L96 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
ALPK3Q96L96 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
ALPK3Q96L96 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
ALPK3Q96L96 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
ALPK3Q96L96 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
ALPK3Q96L96 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
ALPK3Q96L96 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC16.4■□□□□ 0.22
ALPK3Q96L96 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
ALPK3Q96L96 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC16.4■□□□□ 0.22
ALPK3Q96L96 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC16.4■□□□□ 0.22
ALPK3Q96L96 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
ALPK3Q96L96 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
ALPK3Q96L96 PLAC9P1-201ENST00000397540 389 ntTSL 2 BASIC16.4■□□□□ 0.22
ALPK3Q96L96 AL354892.2-201ENST00000413088 403 ntTSL 5 BASIC16.4■□□□□ 0.22
ALPK3Q96L96 AC156455.1-203ENST00000423999 893 ntTSL 2 BASIC16.4■□□□□ 0.22
ALPK3Q96L96 AC006122.1-201ENST00000493323 440 ntBASIC16.4■□□□□ 0.22
ALPK3Q96L96 PPCDC-205ENST00000563393 1149 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
ALPK3Q96L96 PPCDC-208ENST00000567336 892 ntTSL 5 BASIC16.4■□□□□ 0.22
ALPK3Q96L96 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC16.4■□□□□ 0.22
ALPK3Q96L96 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC16.4■□□□□ 0.22
ALPK3Q96L96 STK26-204ENST00000481105 1835 ntTSL 2 BASIC16.4■□□□□ 0.22
ALPK3Q96L96 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC16.4■□□□□ 0.22
ALPK3Q96L96 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
ALPK3Q96L96 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC16.4■□□□□ 0.22
ALPK3Q96L96 AL138725.1-201ENST00000407347 1314 ntBASIC16.4■□□□□ 0.22
ALPK3Q96L96 PSTPIP1-207ENST00000559295 1349 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
ALPK3Q96L96 AC020910.5-201ENST00000623668 1865 ntBASIC16.4■□□□□ 0.22
ALPK3Q96L96 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
ALPK3Q96L96 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC16.4■□□□□ 0.22
ALPK3Q96L96 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC16.4■□□□□ 0.22
ALPK3Q96L96 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
ALPK3Q96L96 LINC00334-203ENST00000638500 1377 ntTSL 5 BASIC16.4■□□□□ 0.22
ALPK3Q96L96 AL157414.3-201ENST00000624276 1954 ntBASIC16.4■□□□□ 0.22
ALPK3Q96L96 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
ALPK3Q96L96 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
ALPK3Q96L96 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
ALPK3Q96L96 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
ALPK3Q96L96 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC16.4■□□□□ 0.22
ALPK3Q96L96 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
ALPK3Q96L96 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC16.4■□□□□ 0.22
ALPK3Q96L96 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
ALPK3Q96L96 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.22
ALPK3Q96L96 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
ALPK3Q96L96 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
ALPK3Q96L96 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
ALPK3Q96L96 MMP7-201ENST00000260227 1125 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
ALPK3Q96L96 HIST1H2AE-201ENST00000303910 509 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
ALPK3Q96L96 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
ALPK3Q96L96 TNNT2-203ENST00000367315 1083 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
ALPK3Q96L96 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC16.39■□□□□ 0.21
ALPK3Q96L96 CTHRC1-202ENST00000415886 571 ntTSL 2 BASIC16.39■□□□□ 0.21
ALPK3Q96L96 AC019118.2-201ENST00000425776 718 ntTSL 5 BASIC16.39■□□□□ 0.21
ALPK3Q96L96 CSTF3-202ENST00000431742 715 ntTSL 2 BASIC16.39■□□□□ 0.21
ALPK3Q96L96 RNF216P1-212ENST00000493407 659 ntTSL 3 BASIC16.39■□□□□ 0.21
ALPK3Q96L96 AL365275.1-201ENST00000518570 471 ntTSL 2 BASIC16.39■□□□□ 0.21
ALPK3Q96L96 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
ALPK3Q96L96 TCL1A-205ENST00000555202 717 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
ALPK3Q96L96 MIR3188-201ENST00000583494 85 ntBASIC16.39■□□□□ 0.21
ALPK3Q96L96 SIGLEC18P-201ENST00000602271 909 ntBASIC16.39■□□□□ 0.21
ALPK3Q96L96 DDX5-235ENST00000630471 473 ntTSL 4 BASIC16.39■□□□□ 0.21
ALPK3Q96L96 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC16.39■□□□□ 0.21
ALPK3Q96L96 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
ALPK3Q96L96 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC16.39■□□□□ 0.21
ALPK3Q96L96 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
ALPK3Q96L96 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC16.39■□□□□ 0.21
ALPK3Q96L96 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC16.39■□□□□ 0.21
ALPK3Q96L96 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
ALPK3Q96L96 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
ALPK3Q96L96 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
ALPK3Q96L96 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
ALPK3Q96L96 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
ALPK3Q96L96 C3orf33-205ENST00000534941 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
ALPK3Q96L96 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
ALPK3Q96L96 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
ALPK3Q96L96 AC092171.3-201ENST00000610122 2651 ntBASIC16.39■□□□□ 0.21
ALPK3Q96L96 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
ALPK3Q96L96 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC16.39■□□□□ 0.21
ALPK3Q96L96 ABHD4-201ENST00000216327 716 ntTSL 5 BASIC16.39■□□□□ 0.21
ALPK3Q96L96 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC16.39■□□□□ 0.21
ALPK3Q96L96 MAPK3-204ENST00000395200 997 ntTSL 3 BASIC16.39■□□□□ 0.21
ALPK3Q96L96 NUPL2-202ENST00000410002 680 ntTSL 2 BASIC16.39■□□□□ 0.21
ALPK3Q96L96 AL645933.1-201ENST00000440087 609 ntBASIC16.39■□□□□ 0.21
ALPK3Q96L96 PCBP1-AS1-214ENST00000419542 1309 ntTSL 5 BASIC16.39■□□□□ 0.21
ALPK3Q96L96 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
ALPK3Q96L96 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
ALPK3Q96L96 USP4-203ENST00000415188 1454 ntTSL 3 BASIC16.39■□□□□ 0.21
ALPK3Q96L96 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
ALPK3Q96L96 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
ALPK3Q96L96 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC16.39■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 60.4 ms