Protein–RNA interactions for Protein: Q96D46

NMD3, 60S ribosomal export protein NMD3, humanhuman

Known RBP Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NMD3Q96D46 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC14.8□□□□□ -0.04
NMD3Q96D46 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
NMD3Q96D46 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC14.8□□□□□ -0.04
NMD3Q96D46 WT1-AS_2.1-201ENST00000613208 137 ntBASIC14.8□□□□□ -0.04
NMD3Q96D46 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC14.8□□□□□ -0.04
NMD3Q96D46 AP001350.2-201ENST00000625104 1094 ntBASIC14.8□□□□□ -0.04
NMD3Q96D46 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC14.8□□□□□ -0.04
NMD3Q96D46 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC14.8□□□□□ -0.04
NMD3Q96D46 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
NMD3Q96D46 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC14.8□□□□□ -0.04
NMD3Q96D46 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
NMD3Q96D46 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
NMD3Q96D46 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
NMD3Q96D46 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
NMD3Q96D46 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC14.8□□□□□ -0.04
NMD3Q96D46 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
NMD3Q96D46 FAAP100-202ENST00000425898 2996 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
NMD3Q96D46 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
NMD3Q96D46 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
NMD3Q96D46 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
NMD3Q96D46 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC14.8□□□□□ -0.04
NMD3Q96D46 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
NMD3Q96D46 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC14.8□□□□□ -0.04
NMD3Q96D46 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC14.8□□□□□ -0.04
NMD3Q96D46 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC14.8□□□□□ -0.04
NMD3Q96D46 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC14.8□□□□□ -0.04
NMD3Q96D46 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
NMD3Q96D46 CDYL2-203ENST00000562812 2086 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
NMD3Q96D46 CDYL2-204ENST00000563890 2086 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
NMD3Q96D46 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
NMD3Q96D46 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
NMD3Q96D46 ACKR3-201ENST00000272928 2203 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
NMD3Q96D46 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
NMD3Q96D46 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
NMD3Q96D46 CTCFL-205ENST00000423479 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
NMD3Q96D46 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
NMD3Q96D46 AP4B1-201ENST00000256658 2742 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
NMD3Q96D46 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
NMD3Q96D46 FAM109A-201ENST00000361483 3256 ntAPPRIS ALT2 TSL 3 BASIC14.79□□□□□ -0.04
NMD3Q96D46 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
NMD3Q96D46 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
NMD3Q96D46 GAD2-203ENST00000376261 5858 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
NMD3Q96D46 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC14.79□□□□□ -0.04
NMD3Q96D46 INVS-201ENST00000262456 2968 ntTSL 5 BASIC14.79□□□□□ -0.04
NMD3Q96D46 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC14.79□□□□□ -0.04
NMD3Q96D46 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
NMD3Q96D46 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
NMD3Q96D46 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
NMD3Q96D46 PRRT2-201ENST00000300797 3002 ntTSL 2 BASIC14.79□□□□□ -0.04
NMD3Q96D46 FBXO34-201ENST00000313833 3464 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
NMD3Q96D46 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
NMD3Q96D46 PCDH8-201ENST00000338862 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
NMD3Q96D46 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
NMD3Q96D46 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
NMD3Q96D46 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
NMD3Q96D46 DHX16-202ENST00000376442 3445 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
NMD3Q96D46 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
NMD3Q96D46 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC14.79□□□□□ -0.04
NMD3Q96D46 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC14.79□□□□□ -0.04
NMD3Q96D46 CCDC117-202ENST00000421503 3766 ntTSL 2 BASIC14.79□□□□□ -0.04
NMD3Q96D46 WDR53-204ENST00000433160 887 ntTSL 5 BASIC14.79□□□□□ -0.04
NMD3Q96D46 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC14.79□□□□□ -0.04
NMD3Q96D46 PENK-208ENST00000523051 772 ntTSL 5 BASIC14.79□□□□□ -0.04
NMD3Q96D46 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC14.79□□□□□ -0.04
NMD3Q96D46 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC14.79□□□□□ -0.04
NMD3Q96D46 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
NMD3Q96D46 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC14.79□□□□□ -0.04
NMD3Q96D46 MIR4751-201ENST00000578027 74 ntBASIC14.79□□□□□ -0.04
NMD3Q96D46 MIR4515-201ENST00000584082 81 ntBASIC14.79□□□□□ -0.04
NMD3Q96D46 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC14.79□□□□□ -0.04
NMD3Q96D46 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
NMD3Q96D46 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
NMD3Q96D46 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
NMD3Q96D46 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC14.79□□□□□ -0.04
NMD3Q96D46 TOLLIP-202ENST00000317204 3617 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
NMD3Q96D46 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC14.79□□□□□ -0.04
NMD3Q96D46 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
NMD3Q96D46 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
NMD3Q96D46 PIK3R5-216ENST00000584803 2653 ntAPPRIS ALT1 TSL 5 BASIC14.79□□□□□ -0.04
NMD3Q96D46 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
NMD3Q96D46 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
NMD3Q96D46 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
NMD3Q96D46 STEAP2-201ENST00000287908 6873 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
NMD3Q96D46 DSN1-207ENST00000448110 2129 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
NMD3Q96D46 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
NMD3Q96D46 NOP9-201ENST00000267425 6033 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
NMD3Q96D46 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC14.78□□□□□ -0.04
NMD3Q96D46 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
NMD3Q96D46 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
NMD3Q96D46 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC14.78□□□□□ -0.04
NMD3Q96D46 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC14.78□□□□□ -0.04
NMD3Q96D46 HOXA3-207ENST00000612286 3396 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
NMD3Q96D46 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC14.78□□□□□ -0.04
NMD3Q96D46 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
NMD3Q96D46 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC14.78□□□□□ -0.04
NMD3Q96D46 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
NMD3Q96D46 LIG1-203ENST00000536218 3179 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
NMD3Q96D46 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC14.78□□□□□ -0.04
NMD3Q96D46 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
NMD3Q96D46 ARMCX2-201ENST00000328766 2762 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 49.7 ms