Protein–RNA interactions for Protein: Q969H4

CNKSR1, Connector enhancer of kinase suppressor of ras 1, humanhuman

Predictions only

Length 720 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1Q969H4 AC069224.1-201ENST00000566372 1715 ntBASIC18.71■□□□□ 0.59
CNKSR1Q969H4 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
CNKSR1Q969H4 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
CNKSR1Q969H4 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC18.71■□□□□ 0.59
CNKSR1Q969H4 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CNKSR1Q969H4 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC18.71■□□□□ 0.59
CNKSR1Q969H4 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CNKSR1Q969H4 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CNKSR1Q969H4 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CNKSR1Q969H4 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CNKSR1Q969H4 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CNKSR1Q969H4 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
CNKSR1Q969H4 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
CNKSR1Q969H4 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC18.71■□□□□ 0.59
CNKSR1Q969H4 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CNKSR1Q969H4 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
CNKSR1Q969H4 DLG1-AS1-202ENST00000430666 1694 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CNKSR1Q969H4 AL357558.1-201ENST00000416646 456 ntTSL 2 BASIC18.71■□□□□ 0.59
CNKSR1Q969H4 DMAC2-203ENST00000417807 1065 ntTSL 2 BASIC18.71■□□□□ 0.59
CNKSR1Q969H4 ISCA2P1-201ENST00000425548 448 ntBASIC18.71■□□□□ 0.59
CNKSR1Q969H4 NOC2LP1-201ENST00000450578 752 ntBASIC18.71■□□□□ 0.59
CNKSR1Q969H4 KLK11-204ENST00000453757 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
CNKSR1Q969H4 SZRD1-203ENST00000471507 892 ntAPPRIS ALT1 TSL 2 BASIC18.71■□□□□ 0.59
CNKSR1Q969H4 RTN3P1-201ENST00000536295 711 ntBASIC18.71■□□□□ 0.59
CNKSR1Q969H4 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CNKSR1Q969H4 ANKRD11-208ENST00000563291 593 ntTSL 5 BASIC18.71■□□□□ 0.59
CNKSR1Q969H4 SNORD3B-2-202ENST00000571722 791 ntBASIC18.71■□□□□ 0.59
CNKSR1Q969H4 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
CNKSR1Q969H4 AC011825.3-201ENST00000583184 565 ntTSL 5 BASIC18.71■□□□□ 0.59
CNKSR1Q969H4 PYY-202ENST00000592796 580 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CNKSR1Q969H4 AL031665.1-201ENST00000619766 572 ntTSL 4 BASIC18.71■□□□□ 0.59
CNKSR1Q969H4 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CNKSR1Q969H4 MVK-214ENST00000629016 1591 ntTSL 5 BASIC18.71■□□□□ 0.59
CNKSR1Q969H4 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CNKSR1Q969H4 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
CNKSR1Q969H4 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CNKSR1Q969H4 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC18.71■□□□□ 0.59
CNKSR1Q969H4 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CNKSR1Q969H4 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
CNKSR1Q969H4 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CNKSR1Q969H4 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC18.7■□□□□ 0.58
CNKSR1Q969H4 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
CNKSR1Q969H4 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CNKSR1Q969H4 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
CNKSR1Q969H4 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC18.7■□□□□ 0.58
CNKSR1Q969H4 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
CNKSR1Q969H4 MRPS22-201ENST00000310776 1120 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
CNKSR1Q969H4 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC18.7■□□□□ 0.58
CNKSR1Q969H4 AIMP2-202ENST00000395236 860 ntTSL 2 BASIC18.7■□□□□ 0.58
CNKSR1Q969H4 HNRNPA1P41-201ENST00000397777 928 ntBASIC18.7■□□□□ 0.58
CNKSR1Q969H4 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
CNKSR1Q969H4 AL139246.4-201ENST00000442305 514 ntTSL 3 BASIC18.7■□□□□ 0.58
CNKSR1Q969H4 FETUB-207ENST00000450521 1410 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CNKSR1Q969H4 EFCAB10-201ENST00000460135 717 ntTSL 2 BASIC18.7■□□□□ 0.58
CNKSR1Q969H4 AC116345.2-201ENST00000512837 523 ntBASIC18.7■□□□□ 0.58
CNKSR1Q969H4 IGLV3-15-201ENST00000518356 244 ntBASIC18.7■□□□□ 0.58
CNKSR1Q969H4 AC090857.1-201ENST00000527400 390 ntBASIC18.7■□□□□ 0.58
CNKSR1Q969H4 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC18.7■□□□□ 0.58
CNKSR1Q969H4 AL160314.3-201ENST00000556041 767 ntBASIC18.7■□□□□ 0.58
CNKSR1Q969H4 HDDC2-204ENST00000608295 879 ntTSL 5 BASIC18.7■□□□□ 0.58
CNKSR1Q969H4 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CNKSR1Q969H4 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC18.7■□□□□ 0.58
CNKSR1Q969H4 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CNKSR1Q969H4 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
CNKSR1Q969H4 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
CNKSR1Q969H4 AL596087.1-201ENST00000400979 1969 ntBASIC18.7■□□□□ 0.58
CNKSR1Q969H4 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
CNKSR1Q969H4 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CNKSR1Q969H4 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC18.69■□□□□ 0.58
CNKSR1Q969H4 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CNKSR1Q969H4 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CNKSR1Q969H4 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC18.69■□□□□ 0.58
CNKSR1Q969H4 PLAG1-203ENST00000429357 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CNKSR1Q969H4 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CNKSR1Q969H4 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CNKSR1Q969H4 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CNKSR1Q969H4 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CNKSR1Q969H4 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC18.69■□□□□ 0.58
CNKSR1Q969H4 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
CNKSR1Q969H4 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CNKSR1Q969H4 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CNKSR1Q969H4 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CNKSR1Q969H4 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC18.69■□□□□ 0.58
CNKSR1Q969H4 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CNKSR1Q969H4 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC18.69■□□□□ 0.58
CNKSR1Q969H4 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
CNKSR1Q969H4 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
CNKSR1Q969H4 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CNKSR1Q969H4 IL27-201ENST00000356897 1044 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
CNKSR1Q969H4 CITED1-202ENST00000373619 886 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
CNKSR1Q969H4 CST9L-201ENST00000376979 959 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CNKSR1Q969H4 AL355334.1-201ENST00000417713 215 ntBASIC18.69■□□□□ 0.58
CNKSR1Q969H4 HLA-K-203ENST00000430151 1046 ntBASIC18.69■□□□□ 0.58
CNKSR1Q969H4 AL590617.2-201ENST00000432673 917 ntTSL 3 BASIC18.69■□□□□ 0.58
CNKSR1Q969H4 FAM58BP-201ENST00000439056 645 ntBASIC18.69■□□□□ 0.58
CNKSR1Q969H4 FGFR3P1-201ENST00000449999 601 ntBASIC18.69■□□□□ 0.58
CNKSR1Q969H4 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CNKSR1Q969H4 RPL18P13-201ENST00000478088 569 ntBASIC18.69■□□□□ 0.58
CNKSR1Q969H4 CDC23-208ENST00000505120 455 ntTSL 3 BASIC18.69■□□□□ 0.58
CNKSR1Q969H4 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 50.1 ms