Protein–RNA interactions for Protein: Q92834

RPGR, X-linked retinitis pigmentosa GTPase regulator, humanhuman

Known RBP Predictions only

Length 1,020 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPGRQ92834 RN7SL11P-201ENST00000471305 293 ntBASIC18.9■□□□□ 0.62
RPGRQ92834 RN7SL720P-201ENST00000488178 304 ntBASIC18.9■□□□□ 0.62
RPGRQ92834 EIF3M-203ENST00000524896 1207 ntTSL 2 BASIC18.9■□□□□ 0.62
RPGRQ92834 TP53AIP1-205ENST00000531399 806 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
RPGRQ92834 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
RPGRQ92834 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RPGRQ92834 LRWD1-209ENST00000626402 138 ntTSL 3 BASIC18.9■□□□□ 0.62
RPGRQ92834 PLEKHB2-211ENST00000628582 1297 ntTSL 2 BASIC18.9■□□□□ 0.62
RPGRQ92834 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
RPGRQ92834 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC18.9■□□□□ 0.62
RPGRQ92834 AC127383.1-201ENST00000444697 1800 ntBASIC18.9■□□□□ 0.62
RPGRQ92834 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
RPGRQ92834 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC18.9■□□□□ 0.62
RPGRQ92834 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
RPGRQ92834 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC18.9■□□□□ 0.62
RPGRQ92834 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC18.9■□□□□ 0.62
RPGRQ92834 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
RPGRQ92834 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
RPGRQ92834 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC18.89■□□□□ 0.62
RPGRQ92834 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC18.89■□□□□ 0.62
RPGRQ92834 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RPGRQ92834 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC18.89■□□□□ 0.61
RPGRQ92834 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
RPGRQ92834 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC18.89■□□□□ 0.61
RPGRQ92834 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC18.89■□□□□ 0.61
RPGRQ92834 COX4I1-201ENST00000253452 708 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RPGRQ92834 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RPGRQ92834 NFYC-202ENST00000372651 1202 ntAPPRIS P3 TSL 5 BASIC18.89■□□□□ 0.61
RPGRQ92834 DKFZp779M0652-201ENST00000378779 649 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
RPGRQ92834 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC18.89■□□□□ 0.61
RPGRQ92834 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
RPGRQ92834 AL136309.1-201ENST00000403917 691 ntBASIC18.89■□□□□ 0.61
RPGRQ92834 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
RPGRQ92834 AL008707.1-201ENST00000422498 534 ntBASIC18.89■□□□□ 0.61
RPGRQ92834 Z97180.1-201ENST00000445173 988 ntBASIC18.89■□□□□ 0.61
RPGRQ92834 TCEAL4-208ENST00000472484 1273 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
RPGRQ92834 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
RPGRQ92834 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
RPGRQ92834 Z84492.1-201ENST00000606589 408 ntAPPRIS P1 TSL 3 BASIC18.89■□□□□ 0.61
RPGRQ92834 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC18.89■□□□□ 0.61
RPGRQ92834 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RPGRQ92834 NKILA-202ENST00000614771 2598 ntBASIC18.89■□□□□ 0.61
RPGRQ92834 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RPGRQ92834 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
RPGRQ92834 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC18.89■□□□□ 0.61
RPGRQ92834 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
RPGRQ92834 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC18.89■□□□□ 0.61
RPGRQ92834 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RPGRQ92834 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
RPGRQ92834 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
RPGRQ92834 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RPGRQ92834 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC18.89■□□□□ 0.61
RPGRQ92834 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
RPGRQ92834 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RPGRQ92834 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RPGRQ92834 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RPGRQ92834 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RPGRQ92834 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
RPGRQ92834 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RPGRQ92834 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
RPGRQ92834 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC18.88■□□□□ 0.61
RPGRQ92834 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RPGRQ92834 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RPGRQ92834 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC18.88■□□□□ 0.61
RPGRQ92834 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC18.88■□□□□ 0.61
RPGRQ92834 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RPGRQ92834 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
RPGRQ92834 CRCP-204ENST00000398684 492 ntTSL 2 BASIC18.88■□□□□ 0.61
RPGRQ92834 PENK-202ENST00000451791 1029 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RPGRQ92834 FTLP10-202ENST00000505798 471 ntBASIC18.88■□□□□ 0.61
RPGRQ92834 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
RPGRQ92834 AP003419.2-201ENST00000543494 711 ntAPPRIS P1 TSL 3 BASIC18.88■□□□□ 0.61
RPGRQ92834 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC18.88■□□□□ 0.61
RPGRQ92834 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC18.88■□□□□ 0.61
RPGRQ92834 IGFLR1-211ENST00000592889 782 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
RPGRQ92834 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC18.88■□□□□ 0.61
RPGRQ92834 AC138466.3-201ENST00000619983 221 ntBASIC18.88■□□□□ 0.61
RPGRQ92834 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC18.88■□□□□ 0.61
RPGRQ92834 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC18.88■□□□□ 0.61
RPGRQ92834 KRT8P29-201ENST00000420409 1371 ntBASIC18.88■□□□□ 0.61
RPGRQ92834 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC18.88■□□□□ 0.61
RPGRQ92834 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RPGRQ92834 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RPGRQ92834 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RPGRQ92834 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RPGRQ92834 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
RPGRQ92834 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC18.88■□□□□ 0.61
RPGRQ92834 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RPGRQ92834 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RPGRQ92834 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
RPGRQ92834 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RPGRQ92834 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC18.88■□□□□ 0.61
RPGRQ92834 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
RPGRQ92834 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RPGRQ92834 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RPGRQ92834 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RPGRQ92834 RBFOX2-201ENST00000262829 1538 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
RPGRQ92834 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RPGRQ92834 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RPGRQ92834 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 68.5 ms