Protein–RNA interactions for Protein: Q8NDP4

ZNF439, Zinc finger protein 439, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF439Q8NDP4 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
ZNF439Q8NDP4 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
ZNF439Q8NDP4 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
ZNF439Q8NDP4 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
ZNF439Q8NDP4 SPIN3-204ENST00000638257 4835 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
ZNF439Q8NDP4 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
ZNF439Q8NDP4 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
ZNF439Q8NDP4 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
ZNF439Q8NDP4 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
ZNF439Q8NDP4 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
ZNF439Q8NDP4 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
ZNF439Q8NDP4 AC090826.2-201ENST00000568496 4946 ntTSL 2 BASIC12.92□□□□□ -0.34
ZNF439Q8NDP4 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC12.92□□□□□ -0.34
ZNF439Q8NDP4 ANKRD11-203ENST00000378330 9132 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
ZNF439Q8NDP4 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
ZNF439Q8NDP4 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC12.91□□□□□ -0.34
ZNF439Q8NDP4 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC12.91□□□□□ -0.34
ZNF439Q8NDP4 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC12.91□□□□□ -0.34
ZNF439Q8NDP4 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
ZNF439Q8NDP4 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
ZNF439Q8NDP4 NOL9-201ENST00000377705 6649 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
ZNF439Q8NDP4 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
ZNF439Q8NDP4 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
ZNF439Q8NDP4 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
ZNF439Q8NDP4 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
ZNF439Q8NDP4 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC12.91□□□□□ -0.34
ZNF439Q8NDP4 ST6GAL1-201ENST00000169298 4645 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
ZNF439Q8NDP4 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
ZNF439Q8NDP4 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC12.91□□□□□ -0.34
ZNF439Q8NDP4 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC12.91□□□□□ -0.34
ZNF439Q8NDP4 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
ZNF439Q8NDP4 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
ZNF439Q8NDP4 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC12.91□□□□□ -0.34
ZNF439Q8NDP4 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
ZNF439Q8NDP4 PTPN23-201ENST00000265562 5244 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
ZNF439Q8NDP4 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC12.91□□□□□ -0.34
ZNF439Q8NDP4 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
ZNF439Q8NDP4 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
ZNF439Q8NDP4 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
ZNF439Q8NDP4 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
ZNF439Q8NDP4 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
ZNF439Q8NDP4 RPL37AP1-201ENST00000412502 279 ntBASIC12.91□□□□□ -0.34
ZNF439Q8NDP4 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC12.91□□□□□ -0.34
ZNF439Q8NDP4 TARDBPP1-201ENST00000442013 1203 ntBASIC12.91□□□□□ -0.34
ZNF439Q8NDP4 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
ZNF439Q8NDP4 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
ZNF439Q8NDP4 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC12.91□□□□□ -0.34
ZNF439Q8NDP4 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC12.91□□□□□ -0.34
ZNF439Q8NDP4 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC12.91□□□□□ -0.34
ZNF439Q8NDP4 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC12.91□□□□□ -0.34
ZNF439Q8NDP4 VPS29-207ENST00000549970 818 ntTSL 3 BASIC12.91□□□□□ -0.34
ZNF439Q8NDP4 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
ZNF439Q8NDP4 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC12.91□□□□□ -0.34
ZNF439Q8NDP4 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC12.91□□□□□ -0.34
ZNF439Q8NDP4 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
ZNF439Q8NDP4 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC12.91□□□□□ -0.34
ZNF439Q8NDP4 AL691403.2-201ENST00000618460 490 ntBASIC12.91□□□□□ -0.34
ZNF439Q8NDP4 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC12.91□□□□□ -0.34
ZNF439Q8NDP4 AC079781.4-201ENST00000641908 219 ntBASIC12.91□□□□□ -0.34
ZNF439Q8NDP4 NDFIP2-205ENST00000612570 4648 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
ZNF439Q8NDP4 GRAMD4P3-201ENST00000621665 1669 ntBASIC12.91□□□□□ -0.34
ZNF439Q8NDP4 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
ZNF439Q8NDP4 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC12.91□□□□□ -0.34
ZNF439Q8NDP4 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
ZNF439Q8NDP4 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
ZNF439Q8NDP4 FAM13B-201ENST00000033079 5465 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
ZNF439Q8NDP4 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC12.91□□□□□ -0.34
ZNF439Q8NDP4 AC006486.2-201ENST00000624246 2199 ntBASIC12.91□□□□□ -0.34
ZNF439Q8NDP4 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
ZNF439Q8NDP4 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
ZNF439Q8NDP4 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
ZNF439Q8NDP4 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
ZNF439Q8NDP4 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
ZNF439Q8NDP4 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
ZNF439Q8NDP4 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
ZNF439Q8NDP4 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
ZNF439Q8NDP4 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC12.91□□□□□ -0.34
ZNF439Q8NDP4 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC12.91□□□□□ -0.34
ZNF439Q8NDP4 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
ZNF439Q8NDP4 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
ZNF439Q8NDP4 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
ZNF439Q8NDP4 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
ZNF439Q8NDP4 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
ZNF439Q8NDP4 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC12.9□□□□□ -0.34
ZNF439Q8NDP4 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
ZNF439Q8NDP4 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
ZNF439Q8NDP4 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
ZNF439Q8NDP4 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC12.9□□□□□ -0.34
ZNF439Q8NDP4 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC12.9□□□□□ -0.34
ZNF439Q8NDP4 PGR-210ENST00000619228 3038 ntTSL 5 BASIC12.9□□□□□ -0.34
ZNF439Q8NDP4 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC12.9□□□□□ -0.34
ZNF439Q8NDP4 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
ZNF439Q8NDP4 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
ZNF439Q8NDP4 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
ZNF439Q8NDP4 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
ZNF439Q8NDP4 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
ZNF439Q8NDP4 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
ZNF439Q8NDP4 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
ZNF439Q8NDP4 HNRNPFP1-201ENST00000391730 1133 ntBASIC12.9□□□□□ -0.34
ZNF439Q8NDP4 AC074338.1-201ENST00000416825 156 ntBASIC12.9□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 47.8 ms