Protein–RNA interactions for Protein: Q8IVE0

CROCCP3, Putative ciliary rootlet coiled-coil protein-like 2 protein, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3Q8IVE0 ATG3-202ENST00000402314 3010 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CROCCP3Q8IVE0 TGM1-201ENST00000206765 2777 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CROCCP3Q8IVE0 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
CROCCP3Q8IVE0 COL6A3-202ENST00000347401 8625 ntTSL 5 BASIC14.12□□□□□ -0.15
CROCCP3Q8IVE0 COL6A3-209ENST00000472056 8628 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CROCCP3Q8IVE0 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CROCCP3Q8IVE0 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC14.12□□□□□ -0.15
CROCCP3Q8IVE0 COLGALT1-201ENST00000252599 3704 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
CROCCP3Q8IVE0 KIRREL1-204ENST00000368173 7519 ntTSL 2 BASIC14.12□□□□□ -0.15
CROCCP3Q8IVE0 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
CROCCP3Q8IVE0 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CROCCP3Q8IVE0 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CROCCP3Q8IVE0 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
CROCCP3Q8IVE0 DTD2-201ENST00000310850 2717 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CROCCP3Q8IVE0 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
CROCCP3Q8IVE0 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC14.12□□□□□ -0.15
CROCCP3Q8IVE0 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC14.12□□□□□ -0.15
CROCCP3Q8IVE0 RBSN-204ENST00000449050 903 ntTSL 2 BASIC14.12□□□□□ -0.15
CROCCP3Q8IVE0 BX276092.5-203ENST00000456199 560 ntBASIC14.12□□□□□ -0.15
CROCCP3Q8IVE0 AL671277.2-201ENST00000458060 996 ntBASIC14.12□□□□□ -0.15
CROCCP3Q8IVE0 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC14.12□□□□□ -0.15
CROCCP3Q8IVE0 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CROCCP3Q8IVE0 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC14.12□□□□□ -0.15
CROCCP3Q8IVE0 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC14.12□□□□□ -0.15
CROCCP3Q8IVE0 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC14.12□□□□□ -0.15
CROCCP3Q8IVE0 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC14.12□□□□□ -0.15
CROCCP3Q8IVE0 AL121672.3-201ENST00000608644 468 ntBASIC14.12□□□□□ -0.15
CROCCP3Q8IVE0 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CROCCP3Q8IVE0 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
CROCCP3Q8IVE0 AL022326.1-202ENST00000641533 845 ntBASIC14.12□□□□□ -0.15
CROCCP3Q8IVE0 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
CROCCP3Q8IVE0 TNIK-204ENST00000436636 6970 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
CROCCP3Q8IVE0 TNPO2-218ENST00000592287 2914 ntAPPRIS P4 TSL 1 (best) BASIC14.12□□□□□ -0.15
CROCCP3Q8IVE0 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
CROCCP3Q8IVE0 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CROCCP3Q8IVE0 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
CROCCP3Q8IVE0 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CROCCP3Q8IVE0 TRIB1-201ENST00000311922 3635 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CROCCP3Q8IVE0 PCMTD2-204ENST00000369758 3212 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CROCCP3Q8IVE0 EMC10-201ENST00000334976 9446 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
CROCCP3Q8IVE0 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
CROCCP3Q8IVE0 PCDHB16-201ENST00000609684 5001 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
CROCCP3Q8IVE0 ATP2C2-AS1-201ENST00000565700 2998 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CROCCP3Q8IVE0 ADAMTS5-201ENST00000284987 9056 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CROCCP3Q8IVE0 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CROCCP3Q8IVE0 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
CROCCP3Q8IVE0 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
CROCCP3Q8IVE0 AL359643.2-201ENST00000606227 3273 ntTSL 2 BASIC14.12□□□□□ -0.15
CROCCP3Q8IVE0 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC14.12□□□□□ -0.15
CROCCP3Q8IVE0 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
CROCCP3Q8IVE0 PLCD4-202ENST00000417849 2738 ntAPPRIS P2 TSL 5 BASIC14.12□□□□□ -0.15
CROCCP3Q8IVE0 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC14.12□□□□□ -0.15
CROCCP3Q8IVE0 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
CROCCP3Q8IVE0 C5AR1-201ENST00000355085 2311 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CROCCP3Q8IVE0 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CROCCP3Q8IVE0 ZNF717-204ENST00000478296 3875 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
CROCCP3Q8IVE0 TOM1L2-214ENST00000581396 5595 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CROCCP3Q8IVE0 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC14.12□□□□□ -0.15
CROCCP3Q8IVE0 CD48-201ENST00000368045 1793 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CROCCP3Q8IVE0 SLC4A7-214ENST00000455077 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
CROCCP3Q8IVE0 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CROCCP3Q8IVE0 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CROCCP3Q8IVE0 SLC35C2-203ENST00000372227 2505 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CROCCP3Q8IVE0 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
CROCCP3Q8IVE0 AC114271.1-201ENST00000612689 2813 ntBASIC14.11□□□□□ -0.15
CROCCP3Q8IVE0 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC14.11□□□□□ -0.15
CROCCP3Q8IVE0 LRRC20-201ENST00000355790 3414 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CROCCP3Q8IVE0 ARHGEF9-230ENST00000637178 2145 ntTSL 5 BASIC14.11□□□□□ -0.15
CROCCP3Q8IVE0 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
CROCCP3Q8IVE0 ZNF541-202ENST00000314121 4631 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
CROCCP3Q8IVE0 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CROCCP3Q8IVE0 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC14.11□□□□□ -0.15
CROCCP3Q8IVE0 TTK-201ENST00000230510 3477 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
CROCCP3Q8IVE0 KCNH4-201ENST00000264661 3920 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CROCCP3Q8IVE0 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CROCCP3Q8IVE0 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CROCCP3Q8IVE0 DLX1-203ENST00000361725 2640 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CROCCP3Q8IVE0 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
CROCCP3Q8IVE0 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC14.11□□□□□ -0.15
CROCCP3Q8IVE0 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC14.11□□□□□ -0.15
CROCCP3Q8IVE0 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
CROCCP3Q8IVE0 AC087499.1-201ENST00000418141 1075 ntBASIC14.11□□□□□ -0.15
CROCCP3Q8IVE0 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
CROCCP3Q8IVE0 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CROCCP3Q8IVE0 THAP5-204ENST00000438865 868 ntTSL 2 BASIC14.11□□□□□ -0.15
CROCCP3Q8IVE0 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC14.11□□□□□ -0.15
CROCCP3Q8IVE0 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CROCCP3Q8IVE0 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CROCCP3Q8IVE0 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CROCCP3Q8IVE0 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC14.11□□□□□ -0.15
CROCCP3Q8IVE0 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
CROCCP3Q8IVE0 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC14.11□□□□□ -0.15
CROCCP3Q8IVE0 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC14.11□□□□□ -0.15
CROCCP3Q8IVE0 AC064862.7-201ENST00000604520 867 ntBASIC14.11□□□□□ -0.15
CROCCP3Q8IVE0 AL365330.1-201ENST00000607459 531 ntBASIC14.11□□□□□ -0.15
CROCCP3Q8IVE0 AC073508.3-201ENST00000619697 1419 ntBASIC14.11□□□□□ -0.15
CROCCP3Q8IVE0 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CROCCP3Q8IVE0 DPP3-209ENST00000531863 2974 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CROCCP3Q8IVE0 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
CROCCP3Q8IVE0 SNHG28-201ENST00000368102 2501 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms