Protein–RNA interactions for Protein: Q86YS3

RAB11FIP4, Rab11 family-interacting protein 4, humanhuman

Predictions only

Length 637 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP4Q86YS3 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC18.2■□□□□ 0.5
RAB11FIP4Q86YS3 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
RAB11FIP4Q86YS3 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
RAB11FIP4Q86YS3 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC18.2■□□□□ 0.5
RAB11FIP4Q86YS3 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC18.2■□□□□ 0.5
RAB11FIP4Q86YS3 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC18.2■□□□□ 0.5
RAB11FIP4Q86YS3 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
RAB11FIP4Q86YS3 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC18.2■□□□□ 0.5
RAB11FIP4Q86YS3 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RAB11FIP4Q86YS3 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC18.2■□□□□ 0.5
RAB11FIP4Q86YS3 AC025181.2-201ENST00000606994 802 ntBASIC18.2■□□□□ 0.5
RAB11FIP4Q86YS3 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
RAB11FIP4Q86YS3 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RAB11FIP4Q86YS3 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC18.2■□□□□ 0.5
RAB11FIP4Q86YS3 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RAB11FIP4Q86YS3 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
RAB11FIP4Q86YS3 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC18.2■□□□□ 0.5
RAB11FIP4Q86YS3 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RAB11FIP4Q86YS3 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC18.2■□□□□ 0.5
RAB11FIP4Q86YS3 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
RAB11FIP4Q86YS3 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RAB11FIP4Q86YS3 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
RAB11FIP4Q86YS3 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RAB11FIP4Q86YS3 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RAB11FIP4Q86YS3 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RAB11FIP4Q86YS3 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
RAB11FIP4Q86YS3 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC18.19■□□□□ 0.5
RAB11FIP4Q86YS3 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
RAB11FIP4Q86YS3 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
RAB11FIP4Q86YS3 LINC02228-204ENST00000642115 2962 ntBASIC18.19■□□□□ 0.5
RAB11FIP4Q86YS3 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
RAB11FIP4Q86YS3 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RAB11FIP4Q86YS3 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC18.19■□□□□ 0.5
RAB11FIP4Q86YS3 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
RAB11FIP4Q86YS3 AC011270.2-201ENST00000624293 2550 ntBASIC18.19■□□□□ 0.5
RAB11FIP4Q86YS3 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
RAB11FIP4Q86YS3 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RAB11FIP4Q86YS3 PKIG-203ENST00000372887 769 ntTSL 3 BASIC18.19■□□□□ 0.5
RAB11FIP4Q86YS3 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
RAB11FIP4Q86YS3 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RAB11FIP4Q86YS3 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
RAB11FIP4Q86YS3 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC18.19■□□□□ 0.5
RAB11FIP4Q86YS3 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC18.19■□□□□ 0.5
RAB11FIP4Q86YS3 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RAB11FIP4Q86YS3 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC18.19■□□□□ 0.5
RAB11FIP4Q86YS3 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC18.19■□□□□ 0.5
RAB11FIP4Q86YS3 AC190387.1-201ENST00000551683 408 ntBASIC18.19■□□□□ 0.5
RAB11FIP4Q86YS3 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
RAB11FIP4Q86YS3 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
RAB11FIP4Q86YS3 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC18.19■□□□□ 0.5
RAB11FIP4Q86YS3 AC092364.2-202ENST00000597012 1073 ntBASIC18.19■□□□□ 0.5
RAB11FIP4Q86YS3 YTHDF3-AS1-201ENST00000603538 718 ntBASIC18.19■□□□□ 0.5
RAB11FIP4Q86YS3 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
RAB11FIP4Q86YS3 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RAB11FIP4Q86YS3 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
RAB11FIP4Q86YS3 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
RAB11FIP4Q86YS3 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
RAB11FIP4Q86YS3 CYP2AB1P-202ENST00000454440 1456 ntBASIC18.19■□□□□ 0.5
RAB11FIP4Q86YS3 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
RAB11FIP4Q86YS3 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
RAB11FIP4Q86YS3 GSN-215ENST00000545652 2428 ntTSL 2 BASIC18.19■□□□□ 0.5
RAB11FIP4Q86YS3 STRN-202ENST00000379213 2254 ntTSL 5 BASIC18.19■□□□□ 0.5
RAB11FIP4Q86YS3 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
RAB11FIP4Q86YS3 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC18.19■□□□□ 0.5
RAB11FIP4Q86YS3 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
RAB11FIP4Q86YS3 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC18.19■□□□□ 0.5
RAB11FIP4Q86YS3 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RAB11FIP4Q86YS3 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
RAB11FIP4Q86YS3 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RAB11FIP4Q86YS3 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
RAB11FIP4Q86YS3 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
RAB11FIP4Q86YS3 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC18.18■□□□□ 0.5
RAB11FIP4Q86YS3 SLC7A15P-201ENST00000424028 1363 ntBASIC18.18■□□□□ 0.5
RAB11FIP4Q86YS3 KRT8P44-201ENST00000441609 1350 ntBASIC18.18■□□□□ 0.5
RAB11FIP4Q86YS3 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
RAB11FIP4Q86YS3 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC18.18■□□□□ 0.5
RAB11FIP4Q86YS3 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
RAB11FIP4Q86YS3 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
RAB11FIP4Q86YS3 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
RAB11FIP4Q86YS3 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RAB11FIP4Q86YS3 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RAB11FIP4Q86YS3 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
RAB11FIP4Q86YS3 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC18.18■□□□□ 0.5
RAB11FIP4Q86YS3 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC18.18■□□□□ 0.5
RAB11FIP4Q86YS3 FAM86LP-201ENST00000478302 853 ntBASIC18.18■□□□□ 0.5
RAB11FIP4Q86YS3 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC18.18■□□□□ 0.5
RAB11FIP4Q86YS3 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC18.18■□□□□ 0.5
RAB11FIP4Q86YS3 CDK4-206ENST00000549606 558 ntTSL 2 BASIC18.18■□□□□ 0.5
RAB11FIP4Q86YS3 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC18.18■□□□□ 0.5
RAB11FIP4Q86YS3 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
RAB11FIP4Q86YS3 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC18.18■□□□□ 0.5
RAB11FIP4Q86YS3 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC18.18■□□□□ 0.5
RAB11FIP4Q86YS3 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC18.18■□□□□ 0.5
RAB11FIP4Q86YS3 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RAB11FIP4Q86YS3 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC18.18■□□□□ 0.5
RAB11FIP4Q86YS3 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC18.18■□□□□ 0.5
RAB11FIP4Q86YS3 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
RAB11FIP4Q86YS3 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RAB11FIP4Q86YS3 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RAB11FIP4Q86YS3 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 61.9 ms