Protein–RNA interactions for Protein: Q7L0R7

RNF44, RING finger protein 44, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF44Q7L0R7 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
RNF44Q7L0R7 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
RNF44Q7L0R7 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RNF44Q7L0R7 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RNF44Q7L0R7 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
RNF44Q7L0R7 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC14.88□□□□□ -0.03
RNF44Q7L0R7 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RNF44Q7L0R7 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RNF44Q7L0R7 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
RNF44Q7L0R7 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC14.87□□□□□ -0.03
RNF44Q7L0R7 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
RNF44Q7L0R7 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RNF44Q7L0R7 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RNF44Q7L0R7 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
RNF44Q7L0R7 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC14.87□□□□□ -0.03
RNF44Q7L0R7 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC14.87□□□□□ -0.03
RNF44Q7L0R7 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC14.87□□□□□ -0.03
RNF44Q7L0R7 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RNF44Q7L0R7 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
RNF44Q7L0R7 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RNF44Q7L0R7 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RNF44Q7L0R7 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
RNF44Q7L0R7 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
RNF44Q7L0R7 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
RNF44Q7L0R7 WARS-232ENST00000556645 2508 ntTSL 5 BASIC14.87□□□□□ -0.03
RNF44Q7L0R7 MARC1-201ENST00000366910 7439 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RNF44Q7L0R7 TK2-221ENST00000620035 5060 ntTSL 2 BASIC14.87□□□□□ -0.03
RNF44Q7L0R7 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC14.87□□□□□ -0.03
RNF44Q7L0R7 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC14.87□□□□□ -0.03
RNF44Q7L0R7 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RNF44Q7L0R7 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RNF44Q7L0R7 EDF1-203ENST00000371649 790 ntTSL 2 BASIC14.87□□□□□ -0.03
RNF44Q7L0R7 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
RNF44Q7L0R7 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RNF44Q7L0R7 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RNF44Q7L0R7 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
RNF44Q7L0R7 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
RNF44Q7L0R7 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC14.87□□□□□ -0.03
RNF44Q7L0R7 GAPDHP40-201ENST00000505218 1006 ntBASIC14.87□□□□□ -0.03
RNF44Q7L0R7 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC14.87□□□□□ -0.03
RNF44Q7L0R7 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
RNF44Q7L0R7 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC14.87□□□□□ -0.03
RNF44Q7L0R7 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC14.87□□□□□ -0.03
RNF44Q7L0R7 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC14.87□□□□□ -0.03
RNF44Q7L0R7 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC14.87□□□□□ -0.03
RNF44Q7L0R7 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC14.87□□□□□ -0.03
RNF44Q7L0R7 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
RNF44Q7L0R7 AC124283.3-201ENST00000570869 594 ntBASIC14.87□□□□□ -0.03
RNF44Q7L0R7 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC14.87□□□□□ -0.03
RNF44Q7L0R7 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC14.87□□□□□ -0.03
RNF44Q7L0R7 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC14.87□□□□□ -0.03
RNF44Q7L0R7 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
RNF44Q7L0R7 AC046158.3-201ENST00000624947 2558 ntBASIC14.87□□□□□ -0.03
RNF44Q7L0R7 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
RNF44Q7L0R7 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
RNF44Q7L0R7 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
RNF44Q7L0R7 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
RNF44Q7L0R7 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC14.87□□□□□ -0.03
RNF44Q7L0R7 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
RNF44Q7L0R7 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
RNF44Q7L0R7 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
RNF44Q7L0R7 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RNF44Q7L0R7 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
RNF44Q7L0R7 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
RNF44Q7L0R7 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
RNF44Q7L0R7 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
RNF44Q7L0R7 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RNF44Q7L0R7 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
RNF44Q7L0R7 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
RNF44Q7L0R7 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RNF44Q7L0R7 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
RNF44Q7L0R7 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
RNF44Q7L0R7 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC14.86□□□□□ -0.03
RNF44Q7L0R7 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RNF44Q7L0R7 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
RNF44Q7L0R7 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC14.86□□□□□ -0.03
RNF44Q7L0R7 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
RNF44Q7L0R7 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
RNF44Q7L0R7 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
RNF44Q7L0R7 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
RNF44Q7L0R7 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
RNF44Q7L0R7 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RNF44Q7L0R7 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RNF44Q7L0R7 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RNF44Q7L0R7 CU639417.3-201ENST00000624240 1404 ntBASIC14.86□□□□□ -0.03
RNF44Q7L0R7 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
RNF44Q7L0R7 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RNF44Q7L0R7 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RNF44Q7L0R7 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC14.86□□□□□ -0.03
RNF44Q7L0R7 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC14.86□□□□□ -0.03
RNF44Q7L0R7 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
RNF44Q7L0R7 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
RNF44Q7L0R7 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RNF44Q7L0R7 AC134915.1-201ENST00000426461 574 ntBASIC14.86□□□□□ -0.03
RNF44Q7L0R7 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
RNF44Q7L0R7 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC14.86□□□□□ -0.03
RNF44Q7L0R7 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC14.86□□□□□ -0.03
RNF44Q7L0R7 AC026410.3-201ENST00000514280 936 ntBASIC14.86□□□□□ -0.03
RNF44Q7L0R7 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
RNF44Q7L0R7 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC14.86□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms