Protein–RNA interactions for Protein: Q76G19

PDZD4, PDZ domain-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 769 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD4Q76G19 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PDZD4Q76G19 MFF-223ENST00000524634 647 ntTSL 2 BASIC16.47■□□□□ 0.23
PDZD4Q76G19 AC068587.3-201ENST00000526613 355 ntBASIC16.47■□□□□ 0.23
PDZD4Q76G19 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC16.47■□□□□ 0.23
PDZD4Q76G19 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC16.47■□□□□ 0.23
PDZD4Q76G19 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC16.47■□□□□ 0.23
PDZD4Q76G19 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC16.47■□□□□ 0.23
PDZD4Q76G19 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC16.47■□□□□ 0.23
PDZD4Q76G19 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC16.47■□□□□ 0.23
PDZD4Q76G19 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
PDZD4Q76G19 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
PDZD4Q76G19 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
PDZD4Q76G19 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
PDZD4Q76G19 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PDZD4Q76G19 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PDZD4Q76G19 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PDZD4Q76G19 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
PDZD4Q76G19 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
PDZD4Q76G19 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
PDZD4Q76G19 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC16.47■□□□□ 0.23
PDZD4Q76G19 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
PDZD4Q76G19 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PDZD4Q76G19 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC16.47■□□□□ 0.23
PDZD4Q76G19 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC16.47■□□□□ 0.23
PDZD4Q76G19 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC16.47■□□□□ 0.23
PDZD4Q76G19 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
PDZD4Q76G19 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
PDZD4Q76G19 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
PDZD4Q76G19 DKFZP434H168-201ENST00000567381 1905 ntBASIC16.47■□□□□ 0.23
PDZD4Q76G19 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC16.47■□□□□ 0.23
PDZD4Q76G19 AP003680.1-201ENST00000598970 3660 ntBASIC16.47■□□□□ 0.23
PDZD4Q76G19 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
PDZD4Q76G19 AL607033.1-201ENST00000623900 1599 ntBASIC16.47■□□□□ 0.23
PDZD4Q76G19 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
PDZD4Q76G19 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
PDZD4Q76G19 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PDZD4Q76G19 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
PDZD4Q76G19 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PDZD4Q76G19 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PDZD4Q76G19 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC16.46■□□□□ 0.23
PDZD4Q76G19 REXO1L6P-201ENST00000603433 1515 ntBASIC16.46■□□□□ 0.23
PDZD4Q76G19 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
PDZD4Q76G19 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PDZD4Q76G19 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PDZD4Q76G19 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PDZD4Q76G19 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
PDZD4Q76G19 AC005229.1-201ENST00000392885 409 ntBASIC16.46■□□□□ 0.23
PDZD4Q76G19 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
PDZD4Q76G19 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
PDZD4Q76G19 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
PDZD4Q76G19 KRT18P43-201ENST00000469825 1281 ntBASIC16.46■□□□□ 0.23
PDZD4Q76G19 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC16.46■□□□□ 0.23
PDZD4Q76G19 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC16.46■□□□□ 0.23
PDZD4Q76G19 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC16.46■□□□□ 0.23
PDZD4Q76G19 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PDZD4Q76G19 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC16.46■□□□□ 0.23
PDZD4Q76G19 AC009486.1-201ENST00000569860 813 ntBASIC16.46■□□□□ 0.23
PDZD4Q76G19 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC16.46■□□□□ 0.23
PDZD4Q76G19 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC16.46■□□□□ 0.23
PDZD4Q76G19 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
PDZD4Q76G19 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
PDZD4Q76G19 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PDZD4Q76G19 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PDZD4Q76G19 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC16.46■□□□□ 0.23
PDZD4Q76G19 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PDZD4Q76G19 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC16.46■□□□□ 0.23
PDZD4Q76G19 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC16.46■□□□□ 0.23
PDZD4Q76G19 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC16.46■□□□□ 0.23
PDZD4Q76G19 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC16.46■□□□□ 0.23
PDZD4Q76G19 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PDZD4Q76G19 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC16.46■□□□□ 0.23
PDZD4Q76G19 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC16.46■□□□□ 0.22
PDZD4Q76G19 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
PDZD4Q76G19 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.22
PDZD4Q76G19 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
PDZD4Q76G19 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC16.45■□□□□ 0.22
PDZD4Q76G19 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
PDZD4Q76G19 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
PDZD4Q76G19 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
PDZD4Q76G19 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC16.45■□□□□ 0.22
PDZD4Q76G19 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC16.45■□□□□ 0.22
PDZD4Q76G19 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC16.45■□□□□ 0.22
PDZD4Q76G19 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
PDZD4Q76G19 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC16.45■□□□□ 0.22
PDZD4Q76G19 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
PDZD4Q76G19 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC16.45■□□□□ 0.22
PDZD4Q76G19 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC16.45■□□□□ 0.22
PDZD4Q76G19 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC16.45■□□□□ 0.22
PDZD4Q76G19 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC16.45■□□□□ 0.22
PDZD4Q76G19 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC16.45■□□□□ 0.22
PDZD4Q76G19 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
PDZD4Q76G19 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC16.45■□□□□ 0.22
PDZD4Q76G19 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC16.45■□□□□ 0.22
PDZD4Q76G19 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC16.45■□□□□ 0.22
PDZD4Q76G19 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
PDZD4Q76G19 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
PDZD4Q76G19 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC16.45■□□□□ 0.22
PDZD4Q76G19 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC16.45■□□□□ 0.22
PDZD4Q76G19 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
PDZD4Q76G19 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms