Protein–RNA interactions for Protein: Q71DI3

HIST2H3A, Histone H3.2, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST2H3AQ71DI3 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
HIST2H3AQ71DI3 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
HIST2H3AQ71DI3 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
HIST2H3AQ71DI3 AC100757.3-201ENST00000622361 1406 ntBASIC13.67□□□□□ -0.22
HIST2H3AQ71DI3 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC13.67□□□□□ -0.22
HIST2H3AQ71DI3 POLL-206ENST00000370172 2308 ntTSL 2 BASIC13.67□□□□□ -0.22
HIST2H3AQ71DI3 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
HIST2H3AQ71DI3 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC13.67□□□□□ -0.22
HIST2H3AQ71DI3 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC13.67□□□□□ -0.22
HIST2H3AQ71DI3 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC13.67□□□□□ -0.22
HIST2H3AQ71DI3 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
HIST2H3AQ71DI3 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
HIST2H3AQ71DI3 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC13.67□□□□□ -0.22
HIST2H3AQ71DI3 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC13.67□□□□□ -0.22
HIST2H3AQ71DI3 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC13.67□□□□□ -0.22
HIST2H3AQ71DI3 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
HIST2H3AQ71DI3 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
HIST2H3AQ71DI3 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC13.67□□□□□ -0.22
HIST2H3AQ71DI3 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC13.67□□□□□ -0.22
HIST2H3AQ71DI3 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC13.67□□□□□ -0.22
HIST2H3AQ71DI3 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
HIST2H3AQ71DI3 FAM86GP-201ENST00000448322 971 ntBASIC13.67□□□□□ -0.22
HIST2H3AQ71DI3 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC13.67□□□□□ -0.22
HIST2H3AQ71DI3 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC13.67□□□□□ -0.22
HIST2H3AQ71DI3 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
HIST2H3AQ71DI3 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC13.67□□□□□ -0.22
HIST2H3AQ71DI3 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC13.67□□□□□ -0.22
HIST2H3AQ71DI3 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC13.67□□□□□ -0.22
HIST2H3AQ71DI3 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
HIST2H3AQ71DI3 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
HIST2H3AQ71DI3 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
HIST2H3AQ71DI3 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC13.67□□□□□ -0.22
HIST2H3AQ71DI3 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC13.67□□□□□ -0.22
HIST2H3AQ71DI3 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC13.67□□□□□ -0.22
HIST2H3AQ71DI3 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
HIST2H3AQ71DI3 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
HIST2H3AQ71DI3 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
HIST2H3AQ71DI3 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
HIST2H3AQ71DI3 PARN-202ENST00000420015 2360 ntTSL 2 BASIC13.67□□□□□ -0.22
HIST2H3AQ71DI3 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC13.67□□□□□ -0.22
HIST2H3AQ71DI3 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
HIST2H3AQ71DI3 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC13.67□□□□□ -0.22
HIST2H3AQ71DI3 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
HIST2H3AQ71DI3 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
HIST2H3AQ71DI3 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC13.67□□□□□ -0.22
HIST2H3AQ71DI3 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
HIST2H3AQ71DI3 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
HIST2H3AQ71DI3 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC13.66□□□□□ -0.22
HIST2H3AQ71DI3 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
HIST2H3AQ71DI3 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC13.66□□□□□ -0.22
HIST2H3AQ71DI3 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
HIST2H3AQ71DI3 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
HIST2H3AQ71DI3 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC13.66□□□□□ -0.22
HIST2H3AQ71DI3 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
HIST2H3AQ71DI3 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC13.66□□□□□ -0.22
HIST2H3AQ71DI3 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC13.66□□□□□ -0.22
HIST2H3AQ71DI3 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
HIST2H3AQ71DI3 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC13.66□□□□□ -0.22
HIST2H3AQ71DI3 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
HIST2H3AQ71DI3 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC13.66□□□□□ -0.22
HIST2H3AQ71DI3 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
HIST2H3AQ71DI3 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
HIST2H3AQ71DI3 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
HIST2H3AQ71DI3 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
HIST2H3AQ71DI3 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
HIST2H3AQ71DI3 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
HIST2H3AQ71DI3 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC13.66□□□□□ -0.22
HIST2H3AQ71DI3 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
HIST2H3AQ71DI3 LBH-203ENST00000404397 543 ntTSL 4 BASIC13.66□□□□□ -0.22
HIST2H3AQ71DI3 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC13.66□□□□□ -0.22
HIST2H3AQ71DI3 TREML5P-201ENST00000421694 576 ntBASIC13.66□□□□□ -0.22
HIST2H3AQ71DI3 TSSK5P-201ENST00000423978 907 ntBASIC13.66□□□□□ -0.22
HIST2H3AQ71DI3 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC13.66□□□□□ -0.22
HIST2H3AQ71DI3 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC13.66□□□□□ -0.22
HIST2H3AQ71DI3 SSH2-210ENST00000582084 560 ntTSL 3 BASIC13.66□□□□□ -0.22
HIST2H3AQ71DI3 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
HIST2H3AQ71DI3 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC13.66□□□□□ -0.22
HIST2H3AQ71DI3 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC13.66□□□□□ -0.22
HIST2H3AQ71DI3 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
HIST2H3AQ71DI3 AL109936.8-201ENST00000641772 604 ntBASIC13.66□□□□□ -0.22
HIST2H3AQ71DI3 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
HIST2H3AQ71DI3 PAWR-201ENST00000328827 9129 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
HIST2H3AQ71DI3 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
HIST2H3AQ71DI3 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
HIST2H3AQ71DI3 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
HIST2H3AQ71DI3 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
HIST2H3AQ71DI3 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC13.66□□□□□ -0.22
HIST2H3AQ71DI3 AC138969.3-201ENST00000546612 1459 ntBASIC13.66□□□□□ -0.22
HIST2H3AQ71DI3 AC138932.2-201ENST00000548268 1459 ntBASIC13.66□□□□□ -0.22
HIST2H3AQ71DI3 AC126755.4-201ENST00000549796 1459 ntBASIC13.66□□□□□ -0.22
HIST2H3AQ71DI3 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC13.66□□□□□ -0.22
HIST2H3AQ71DI3 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
HIST2H3AQ71DI3 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
HIST2H3AQ71DI3 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC13.66□□□□□ -0.22
HIST2H3AQ71DI3 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
HIST2H3AQ71DI3 OR2I1P-210ENST00000642037 4691 ntBASIC13.66□□□□□ -0.22
HIST2H3AQ71DI3 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC13.66□□□□□ -0.22
HIST2H3AQ71DI3 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
HIST2H3AQ71DI3 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
HIST2H3AQ71DI3 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms