Protein–RNA interactions for Protein: Q6P4E1

CASC4, Protein CASC4, humanhuman

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4Q6P4E1 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC15.89■□□□□ 0.13
CASC4Q6P4E1 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC15.89■□□□□ 0.13
CASC4Q6P4E1 AC112482.1-201ENST00000492080 688 ntBASIC15.89■□□□□ 0.13
CASC4Q6P4E1 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC15.89■□□□□ 0.13
CASC4Q6P4E1 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC15.89■□□□□ 0.13
CASC4Q6P4E1 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC15.89■□□□□ 0.13
CASC4Q6P4E1 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC15.89■□□□□ 0.13
CASC4Q6P4E1 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CASC4Q6P4E1 RN7SL828P-201ENST00000607615 303 ntBASIC15.89■□□□□ 0.13
CASC4Q6P4E1 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CASC4Q6P4E1 AC007967.4-201ENST00000614700 386 ntBASIC15.89■□□□□ 0.13
CASC4Q6P4E1 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
CASC4Q6P4E1 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
CASC4Q6P4E1 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CASC4Q6P4E1 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC15.89■□□□□ 0.13
CASC4Q6P4E1 SLC43A2-201ENST00000301335 8136 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CASC4Q6P4E1 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CASC4Q6P4E1 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CASC4Q6P4E1 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CASC4Q6P4E1 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC15.89■□□□□ 0.13
CASC4Q6P4E1 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
CASC4Q6P4E1 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC15.89■□□□□ 0.13
CASC4Q6P4E1 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CASC4Q6P4E1 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
CASC4Q6P4E1 AC106881.1-201ENST00000605849 3329 ntBASIC15.89■□□□□ 0.13
CASC4Q6P4E1 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
CASC4Q6P4E1 NIN-202ENST00000324330 4364 ntTSL 5 BASIC15.89■□□□□ 0.13
CASC4Q6P4E1 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
CASC4Q6P4E1 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CASC4Q6P4E1 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
CASC4Q6P4E1 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CASC4Q6P4E1 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CASC4Q6P4E1 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CASC4Q6P4E1 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
CASC4Q6P4E1 AL035456.1-201ENST00000456064 1369 ntBASIC15.88■□□□□ 0.13
CASC4Q6P4E1 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CASC4Q6P4E1 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC15.88■□□□□ 0.13
CASC4Q6P4E1 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CASC4Q6P4E1 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC15.88■□□□□ 0.13
CASC4Q6P4E1 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
CASC4Q6P4E1 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CASC4Q6P4E1 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
CASC4Q6P4E1 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CASC4Q6P4E1 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CASC4Q6P4E1 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC15.88■□□□□ 0.13
CASC4Q6P4E1 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC15.88■□□□□ 0.13
CASC4Q6P4E1 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CASC4Q6P4E1 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CASC4Q6P4E1 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CASC4Q6P4E1 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CASC4Q6P4E1 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CASC4Q6P4E1 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
CASC4Q6P4E1 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC15.88■□□□□ 0.13
CASC4Q6P4E1 AC211486.1-202ENST00000416371 468 ntBASIC15.88■□□□□ 0.13
CASC4Q6P4E1 GPS2P2-201ENST00000430745 888 ntBASIC15.88■□□□□ 0.13
CASC4Q6P4E1 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CASC4Q6P4E1 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
CASC4Q6P4E1 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC15.88■□□□□ 0.13
CASC4Q6P4E1 AC023141.5-201ENST00000458585 616 ntBASIC15.88■□□□□ 0.13
CASC4Q6P4E1 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC15.88■□□□□ 0.13
CASC4Q6P4E1 AC211476.1-201ENST00000503899 468 ntBASIC15.88■□□□□ 0.13
CASC4Q6P4E1 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CASC4Q6P4E1 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
CASC4Q6P4E1 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC15.88■□□□□ 0.13
CASC4Q6P4E1 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
CASC4Q6P4E1 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CASC4Q6P4E1 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC15.88■□□□□ 0.13
CASC4Q6P4E1 MIR4453-201ENST00000584019 89 ntBASIC15.88■□□□□ 0.13
CASC4Q6P4E1 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC15.88■□□□□ 0.13
CASC4Q6P4E1 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC15.88■□□□□ 0.13
CASC4Q6P4E1 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
CASC4Q6P4E1 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
CASC4Q6P4E1 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CASC4Q6P4E1 TRAF1-201ENST00000373887 6324 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CASC4Q6P4E1 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CASC4Q6P4E1 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CASC4Q6P4E1 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CASC4Q6P4E1 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CASC4Q6P4E1 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
CASC4Q6P4E1 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
CASC4Q6P4E1 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
CASC4Q6P4E1 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC15.88■□□□□ 0.13
CASC4Q6P4E1 POLL-217ENST00000628479 1953 ntTSL 5 BASIC15.87■□□□□ 0.13
CASC4Q6P4E1 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
CASC4Q6P4E1 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CASC4Q6P4E1 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CASC4Q6P4E1 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC15.87■□□□□ 0.13
CASC4Q6P4E1 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
CASC4Q6P4E1 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
CASC4Q6P4E1 CICP24-201ENST00000605464 2705 ntBASIC15.87■□□□□ 0.13
CASC4Q6P4E1 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CASC4Q6P4E1 ZC3H4-201ENST00000253048 6119 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
CASC4Q6P4E1 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC15.87■□□□□ 0.13
CASC4Q6P4E1 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
CASC4Q6P4E1 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CASC4Q6P4E1 RPL30-202ENST00000396070 440 ntTSL 2 BASIC15.87■□□□□ 0.13
CASC4Q6P4E1 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC15.87■□□□□ 0.13
CASC4Q6P4E1 RPP21-221ENST00000428040 594 ntTSL 2 BASIC15.87■□□□□ 0.13
CASC4Q6P4E1 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC15.87■□□□□ 0.13
CASC4Q6P4E1 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms