Protein–RNA interactions for Protein: Q5TDP6

LGSN, Lengsin, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LGSNQ5TDP6 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
LGSNQ5TDP6 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC15.7■□□□□ 0.1
LGSNQ5TDP6 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
LGSNQ5TDP6 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC15.7■□□□□ 0.1
LGSNQ5TDP6 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
LGSNQ5TDP6 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
LGSNQ5TDP6 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC15.7■□□□□ 0.1
LGSNQ5TDP6 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
LGSNQ5TDP6 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC15.7■□□□□ 0.1
LGSNQ5TDP6 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
LGSNQ5TDP6 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
LGSNQ5TDP6 UMODL1-206ENST00000408989 5262 ntAPPRIS P4 TSL 1 (best) BASIC15.69■□□□□ 0.1
LGSNQ5TDP6 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
LGSNQ5TDP6 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC15.69■□□□□ 0.1
LGSNQ5TDP6 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC15.69■□□□□ 0.1
LGSNQ5TDP6 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
LGSNQ5TDP6 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
LGSNQ5TDP6 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
LGSNQ5TDP6 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
LGSNQ5TDP6 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
LGSNQ5TDP6 CCDC88A-201ENST00000263630 9667 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
LGSNQ5TDP6 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
LGSNQ5TDP6 KLK8-202ENST00000320838 456 ntTSL 5 BASIC15.69■□□□□ 0.1
LGSNQ5TDP6 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
LGSNQ5TDP6 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC15.69■□□□□ 0.1
LGSNQ5TDP6 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
LGSNQ5TDP6 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
LGSNQ5TDP6 PTMS-202ENST00000389462 773 ntTSL 2 BASIC15.69■□□□□ 0.1
LGSNQ5TDP6 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC15.69■□□□□ 0.1
LGSNQ5TDP6 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
LGSNQ5TDP6 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC15.69■□□□□ 0.1
LGSNQ5TDP6 AL591424.1-201ENST00000442569 1213 ntBASIC15.69■□□□□ 0.1
LGSNQ5TDP6 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC15.69■□□□□ 0.1
LGSNQ5TDP6 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC15.69■□□□□ 0.1
LGSNQ5TDP6 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC15.69■□□□□ 0.1
LGSNQ5TDP6 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC15.69■□□□□ 0.1
LGSNQ5TDP6 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC15.69■□□□□ 0.1
LGSNQ5TDP6 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC15.69■□□□□ 0.1
LGSNQ5TDP6 CAND2-206ENST00000626378 333 ntTSL 5 BASIC15.69■□□□□ 0.1
LGSNQ5TDP6 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC15.69■□□□□ 0.1
LGSNQ5TDP6 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
LGSNQ5TDP6 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
LGSNQ5TDP6 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
LGSNQ5TDP6 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
LGSNQ5TDP6 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC15.69■□□□□ 0.1
LGSNQ5TDP6 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
LGSNQ5TDP6 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC15.69■□□□□ 0.1
LGSNQ5TDP6 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC15.69■□□□□ 0.1
LGSNQ5TDP6 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC15.69■□□□□ 0.1
LGSNQ5TDP6 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
LGSNQ5TDP6 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC15.69■□□□□ 0.1
LGSNQ5TDP6 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
LGSNQ5TDP6 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC15.69■□□□□ 0.1
LGSNQ5TDP6 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
LGSNQ5TDP6 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC15.69■□□□□ 0.1
LGSNQ5TDP6 SUGP2-215ENST00000601879 5546 ntAPPRIS P3 TSL 2 BASIC15.69■□□□□ 0.1
LGSNQ5TDP6 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
LGSNQ5TDP6 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
LGSNQ5TDP6 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC15.68■□□□□ 0.1
LGSNQ5TDP6 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
LGSNQ5TDP6 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
LGSNQ5TDP6 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
LGSNQ5TDP6 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
LGSNQ5TDP6 SPIN3-204ENST00000638257 4835 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
LGSNQ5TDP6 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC15.68■□□□□ 0.1
LGSNQ5TDP6 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
LGSNQ5TDP6 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC15.68■□□□□ 0.1
LGSNQ5TDP6 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC15.68■□□□□ 0.1
LGSNQ5TDP6 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
LGSNQ5TDP6 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC15.68■□□□□ 0.1
LGSNQ5TDP6 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC15.68■□□□□ 0.1
LGSNQ5TDP6 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC15.68■□□□□ 0.1
LGSNQ5TDP6 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
LGSNQ5TDP6 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC15.68■□□□□ 0.1
LGSNQ5TDP6 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC15.68■□□□□ 0.1
LGSNQ5TDP6 AC026120.1-201ENST00000611536 926 ntBASIC15.68■□□□□ 0.1
LGSNQ5TDP6 AC091812.2-201ENST00000619081 385 ntBASIC15.68■□□□□ 0.1
LGSNQ5TDP6 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC15.68■□□□□ 0.1
LGSNQ5TDP6 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
LGSNQ5TDP6 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
LGSNQ5TDP6 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
LGSNQ5TDP6 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
LGSNQ5TDP6 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
LGSNQ5TDP6 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
LGSNQ5TDP6 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
LGSNQ5TDP6 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
LGSNQ5TDP6 RSBN1-204ENST00000612242 6592 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
LGSNQ5TDP6 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC15.68■□□□□ 0.1
LGSNQ5TDP6 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
LGSNQ5TDP6 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC15.68■□□□□ 0.1
LGSNQ5TDP6 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
LGSNQ5TDP6 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
LGSNQ5TDP6 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
LGSNQ5TDP6 CCDC180-210ENST00000529487 5242 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
LGSNQ5TDP6 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
LGSNQ5TDP6 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
LGSNQ5TDP6 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
LGSNQ5TDP6 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
LGSNQ5TDP6 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
LGSNQ5TDP6 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 81.4 ms