Protein–RNA interactions for Protein: Q2Q1W2

TRIM71, E3 ubiquitin-protein ligase TRIM71, humanhuman

Known RBP Predictions only

Length 868 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM71Q2Q1W2 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC16.74■□□□□ 0.27
TRIM71Q2Q1W2 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRIM71Q2Q1W2 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRIM71Q2Q1W2 KRT8P4-201ENST00000509735 1454 ntBASIC16.74■□□□□ 0.27
TRIM71Q2Q1W2 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRIM71Q2Q1W2 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRIM71Q2Q1W2 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
TRIM71Q2Q1W2 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
TRIM71Q2Q1W2 BLK-205ENST00000529894 2017 ntTSL 5 BASIC16.74■□□□□ 0.27
TRIM71Q2Q1W2 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC16.74■□□□□ 0.27
TRIM71Q2Q1W2 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRIM71Q2Q1W2 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
TRIM71Q2Q1W2 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
TRIM71Q2Q1W2 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
TRIM71Q2Q1W2 SDCCAG3P2-201ENST00000326105 1023 ntBASIC16.74■□□□□ 0.27
TRIM71Q2Q1W2 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRIM71Q2Q1W2 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC16.74■□□□□ 0.27
TRIM71Q2Q1W2 CSNK2B-201ENST00000375865 908 ntAPPRIS P1 TSL 3 BASIC16.74■□□□□ 0.27
TRIM71Q2Q1W2 CRYBA2-202ENST00000392096 708 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRIM71Q2Q1W2 CYP46A4P-201ENST00000414953 267 ntBASIC16.74■□□□□ 0.27
TRIM71Q2Q1W2 AL354877.1-201ENST00000424412 413 ntBASIC16.74■□□□□ 0.27
TRIM71Q2Q1W2 SEPT7P2-209ENST00000450436 601 ntTSL 4 BASIC16.74■□□□□ 0.27
TRIM71Q2Q1W2 ATP6V0CP2-201ENST00000469409 207 ntBASIC16.74■□□□□ 0.27
TRIM71Q2Q1W2 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC16.74■□□□□ 0.27
TRIM71Q2Q1W2 TNNT1-203ENST00000536926 901 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
TRIM71Q2Q1W2 AC015967.2-201ENST00000624092 234 ntBASIC16.74■□□□□ 0.27
TRIM71Q2Q1W2 AC006435.4-201ENST00000625037 234 ntBASIC16.74■□□□□ 0.27
TRIM71Q2Q1W2 AL356737.1-201ENST00000634391 234 ntBASIC16.74■□□□□ 0.27
TRIM71Q2Q1W2 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
TRIM71Q2Q1W2 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC16.74■□□□□ 0.27
TRIM71Q2Q1W2 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRIM71Q2Q1W2 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
TRIM71Q2Q1W2 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRIM71Q2Q1W2 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRIM71Q2Q1W2 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRIM71Q2Q1W2 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
TRIM71Q2Q1W2 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRIM71Q2Q1W2 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRIM71Q2Q1W2 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRIM71Q2Q1W2 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRIM71Q2Q1W2 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRIM71Q2Q1W2 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC16.73■□□□□ 0.27
TRIM71Q2Q1W2 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TRIM71Q2Q1W2 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TRIM71Q2Q1W2 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
TRIM71Q2Q1W2 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
TRIM71Q2Q1W2 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
TRIM71Q2Q1W2 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
TRIM71Q2Q1W2 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC16.73■□□□□ 0.27
TRIM71Q2Q1W2 PSME1-201ENST00000206451 1006 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TRIM71Q2Q1W2 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
TRIM71Q2Q1W2 AP000320.1-201ENST00000440403 471 ntTSL 3 BASIC16.73■□□□□ 0.27
TRIM71Q2Q1W2 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
TRIM71Q2Q1W2 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC16.73■□□□□ 0.27
TRIM71Q2Q1W2 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
TRIM71Q2Q1W2 DUX4L47-201ENST00000566374 394 ntBASIC16.73■□□□□ 0.27
TRIM71Q2Q1W2 RN7SL190P-201ENST00000582519 257 ntBASIC16.73■□□□□ 0.27
TRIM71Q2Q1W2 NAT9-222ENST00000583476 583 ntTSL 3 BASIC16.73■□□□□ 0.27
TRIM71Q2Q1W2 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC16.73■□□□□ 0.27
TRIM71Q2Q1W2 DIO1-215ENST00000610607 796 ntTSL 5 BASIC16.73■□□□□ 0.27
TRIM71Q2Q1W2 AC022748.3-201ENST00000621828 275 ntBASIC16.73■□□□□ 0.27
TRIM71Q2Q1W2 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
TRIM71Q2Q1W2 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TRIM71Q2Q1W2 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC16.73■□□□□ 0.27
TRIM71Q2Q1W2 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC16.73■□□□□ 0.27
TRIM71Q2Q1W2 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
TRIM71Q2Q1W2 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TRIM71Q2Q1W2 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC16.73■□□□□ 0.27
TRIM71Q2Q1W2 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TRIM71Q2Q1W2 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC16.73■□□□□ 0.27
TRIM71Q2Q1W2 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC16.72■□□□□ 0.27
TRIM71Q2Q1W2 CLUHP2-201ENST00000426660 1303 ntBASIC16.72■□□□□ 0.27
TRIM71Q2Q1W2 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRIM71Q2Q1W2 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRIM71Q2Q1W2 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
TRIM71Q2Q1W2 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
TRIM71Q2Q1W2 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC16.72■□□□□ 0.27
TRIM71Q2Q1W2 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
TRIM71Q2Q1W2 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRIM71Q2Q1W2 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRIM71Q2Q1W2 SLC25A26-201ENST00000336733 1023 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
TRIM71Q2Q1W2 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRIM71Q2Q1W2 AC012506.3-201ENST00000415245 892 ntTSL 3 BASIC16.72■□□□□ 0.27
TRIM71Q2Q1W2 DGUOK-AS1-202ENST00000439192 563 ntTSL 2 BASIC16.72■□□□□ 0.27
TRIM71Q2Q1W2 AC106786.1-201ENST00000442777 792 ntTSL 3 BASIC16.72■□□□□ 0.27
TRIM71Q2Q1W2 SPTLC1P5-201ENST00000450718 252 ntBASIC16.72■□□□□ 0.27
TRIM71Q2Q1W2 UPF3AP2-201ENST00000457924 1132 ntBASIC16.72■□□□□ 0.27
TRIM71Q2Q1W2 Z84485.1-202ENST00000499560 1230 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
TRIM71Q2Q1W2 MESTP3-201ENST00000503460 968 ntBASIC16.72■□□□□ 0.27
TRIM71Q2Q1W2 RERG-205ENST00000537647 935 ntTSL 2 BASIC16.72■□□□□ 0.27
TRIM71Q2Q1W2 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
TRIM71Q2Q1W2 COG4-212ENST00000564653 590 ntTSL 5 BASIC16.72■□□□□ 0.27
TRIM71Q2Q1W2 TBC1D16-203ENST00000570373 961 ntTSL 5 BASIC16.72■□□□□ 0.27
TRIM71Q2Q1W2 ZFR2-208ENST00000592398 532 ntTSL 5 BASIC16.72■□□□□ 0.27
TRIM71Q2Q1W2 AC010323.1-201ENST00000598884 580 ntAPPRIS P1 TSL 4 BASIC16.72■□□□□ 0.27
TRIM71Q2Q1W2 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC16.72■□□□□ 0.27
TRIM71Q2Q1W2 C17orf50-202ENST00000604830 477 ntTSL 3 BASIC16.72■□□□□ 0.27
TRIM71Q2Q1W2 AC097724.1-201ENST00000609581 426 ntBASIC16.72■□□□□ 0.27
TRIM71Q2Q1W2 AC138466.3-201ENST00000619983 221 ntBASIC16.72■□□□□ 0.27
TRIM71Q2Q1W2 MEF2C-227ENST00000626391 1182 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms