Protein–RNA interactions for Protein: Q12946

FOXF1, Forkhead box protein F1, humanhuman

Predictions only

Length 379 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXF1Q12946 LHX6-205ENST00000464484 666 ntTSL 2 BASIC14.04□□□□□ -0.16
FOXF1Q12946 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC14.04□□□□□ -0.16
FOXF1Q12946 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC14.04□□□□□ -0.16
FOXF1Q12946 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC14.04□□□□□ -0.16
FOXF1Q12946 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC14.04□□□□□ -0.16
FOXF1Q12946 AL109954.1-202ENST00000564051 2148 ntBASIC14.04□□□□□ -0.16
FOXF1Q12946 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC14.04□□□□□ -0.16
FOXF1Q12946 AL662799.1-202ENST00000614205 422 ntBASIC14.04□□□□□ -0.16
FOXF1Q12946 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
FOXF1Q12946 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
FOXF1Q12946 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
FOXF1Q12946 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
FOXF1Q12946 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
FOXF1Q12946 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
FOXF1Q12946 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
FOXF1Q12946 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC14.04□□□□□ -0.16
FOXF1Q12946 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
FOXF1Q12946 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
FOXF1Q12946 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
FOXF1Q12946 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
FOXF1Q12946 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
FOXF1Q12946 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
FOXF1Q12946 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
FOXF1Q12946 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
FOXF1Q12946 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC14.04□□□□□ -0.16
FOXF1Q12946 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
FOXF1Q12946 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
FOXF1Q12946 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
FOXF1Q12946 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC14.04□□□□□ -0.16
FOXF1Q12946 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
FOXF1Q12946 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
FOXF1Q12946 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
FOXF1Q12946 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC14.04□□□□□ -0.16
FOXF1Q12946 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
FOXF1Q12946 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
FOXF1Q12946 AC023024.2-201ENST00000623561 1993 ntBASIC14.03□□□□□ -0.16
FOXF1Q12946 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
FOXF1Q12946 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
FOXF1Q12946 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
FOXF1Q12946 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
FOXF1Q12946 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
FOXF1Q12946 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC14.03□□□□□ -0.16
FOXF1Q12946 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
FOXF1Q12946 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
FOXF1Q12946 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
FOXF1Q12946 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
FOXF1Q12946 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
FOXF1Q12946 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
FOXF1Q12946 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
FOXF1Q12946 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
FOXF1Q12946 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
FOXF1Q12946 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
FOXF1Q12946 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
FOXF1Q12946 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC14.03□□□□□ -0.16
FOXF1Q12946 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
FOXF1Q12946 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC14.03□□□□□ -0.16
FOXF1Q12946 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC14.03□□□□□ -0.16
FOXF1Q12946 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC14.03□□□□□ -0.16
FOXF1Q12946 MIR3197-201ENST00000582241 73 ntBASIC14.03□□□□□ -0.16
FOXF1Q12946 BRI3BPP1-201ENST00000594224 787 ntBASIC14.03□□□□□ -0.16
FOXF1Q12946 NID2-208ENST00000617139 3827 ntTSL 5 BASIC14.03□□□□□ -0.16
FOXF1Q12946 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
FOXF1Q12946 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
FOXF1Q12946 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
FOXF1Q12946 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
FOXF1Q12946 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC14.03□□□□□ -0.16
FOXF1Q12946 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
FOXF1Q12946 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
FOXF1Q12946 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
FOXF1Q12946 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
FOXF1Q12946 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC14.03□□□□□ -0.16
FOXF1Q12946 INTS4P2-202ENST00000614726 2019 ntBASIC14.03□□□□□ -0.16
FOXF1Q12946 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC14.03□□□□□ -0.16
FOXF1Q12946 AC104640.1-201ENST00000562617 2109 ntBASIC14.03□□□□□ -0.16
FOXF1Q12946 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
FOXF1Q12946 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
FOXF1Q12946 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC14.03□□□□□ -0.16
FOXF1Q12946 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
FOXF1Q12946 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
FOXF1Q12946 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
FOXF1Q12946 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
FOXF1Q12946 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
FOXF1Q12946 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
FOXF1Q12946 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
FOXF1Q12946 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC14.03□□□□□ -0.16
FOXF1Q12946 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
FOXF1Q12946 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
FOXF1Q12946 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC14.02□□□□□ -0.16
FOXF1Q12946 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC14.02□□□□□ -0.16
FOXF1Q12946 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
FOXF1Q12946 CELP-203ENST00000624767 2414 ntTSL 5 BASIC14.02□□□□□ -0.16
FOXF1Q12946 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC14.02□□□□□ -0.16
FOXF1Q12946 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
FOXF1Q12946 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC14.02□□□□□ -0.16
FOXF1Q12946 PKD1P5-201ENST00000532415 10291 ntBASIC14.02□□□□□ -0.16
FOXF1Q12946 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
FOXF1Q12946 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
FOXF1Q12946 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.16
FOXF1Q12946 AC126365.1-201ENST00000578585 1514 ntBASIC14.02□□□□□ -0.16
FOXF1Q12946 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms