Protein–RNA interactions for Protein: Q07343

PDE4B, cAMP-specific 3',5'-cyclic phosphodiesterase 4B, humanhuman

Predictions only

Length 736 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4BQ07343 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
PDE4BQ07343 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
PDE4BQ07343 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC18.29■□□□□ 0.52
PDE4BQ07343 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
PDE4BQ07343 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC18.29■□□□□ 0.52
PDE4BQ07343 AP001582.1-201ENST00000525856 295 ntBASIC18.29■□□□□ 0.52
PDE4BQ07343 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC18.29■□□□□ 0.52
PDE4BQ07343 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC18.29■□□□□ 0.52
PDE4BQ07343 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC18.29■□□□□ 0.52
PDE4BQ07343 APOC4-201ENST00000591600 348 ntTSL 3 BASIC18.29■□□□□ 0.52
PDE4BQ07343 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC18.29■□□□□ 0.52
PDE4BQ07343 AL645728.2-202ENST00000641679 227 ntBASIC18.29■□□□□ 0.52
PDE4BQ07343 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
PDE4BQ07343 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
PDE4BQ07343 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PDE4BQ07343 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC18.29■□□□□ 0.52
PDE4BQ07343 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PDE4BQ07343 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
PDE4BQ07343 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PDE4BQ07343 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PDE4BQ07343 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC18.29■□□□□ 0.52
PDE4BQ07343 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
PDE4BQ07343 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PDE4BQ07343 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
PDE4BQ07343 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
PDE4BQ07343 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
PDE4BQ07343 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PDE4BQ07343 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PDE4BQ07343 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PDE4BQ07343 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PDE4BQ07343 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
PDE4BQ07343 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
PDE4BQ07343 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
PDE4BQ07343 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PDE4BQ07343 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
PDE4BQ07343 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PDE4BQ07343 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PDE4BQ07343 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC18.28■□□□□ 0.52
PDE4BQ07343 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
PDE4BQ07343 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
PDE4BQ07343 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
PDE4BQ07343 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PDE4BQ07343 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
PDE4BQ07343 MGST3-203ENST00000367885 680 ntTSL 2 BASIC18.28■□□□□ 0.52
PDE4BQ07343 ACKR1-201ENST00000368121 1240 ntBASIC18.28■□□□□ 0.52
PDE4BQ07343 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC18.28■□□□□ 0.52
PDE4BQ07343 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
PDE4BQ07343 BRF1-202ENST00000379932 884 ntTSL 5 BASIC18.28■□□□□ 0.52
PDE4BQ07343 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC18.28■□□□□ 0.52
PDE4BQ07343 NME2-201ENST00000393183 568 ntTSL 2 BASIC18.28■□□□□ 0.52
PDE4BQ07343 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PDE4BQ07343 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC18.28■□□□□ 0.52
PDE4BQ07343 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC18.28■□□□□ 0.52
PDE4BQ07343 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC18.28■□□□□ 0.52
PDE4BQ07343 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC18.28■□□□□ 0.52
PDE4BQ07343 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
PDE4BQ07343 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
PDE4BQ07343 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
PDE4BQ07343 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
PDE4BQ07343 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
PDE4BQ07343 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PDE4BQ07343 AC020658.6-201ENST00000623564 1870 ntBASIC18.28■□□□□ 0.52
PDE4BQ07343 AC068587.6-202ENST00000641839 5619 ntBASIC18.28■□□□□ 0.52
PDE4BQ07343 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
PDE4BQ07343 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
PDE4BQ07343 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC18.28■□□□□ 0.52
PDE4BQ07343 DBET-201ENST00000630918 3363 ntBASIC18.28■□□□□ 0.52
PDE4BQ07343 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC18.28■□□□□ 0.52
PDE4BQ07343 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
PDE4BQ07343 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
PDE4BQ07343 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PDE4BQ07343 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PDE4BQ07343 USE1-206ENST00000595101 1776 ntTSL 2 BASIC18.27■□□□□ 0.52
PDE4BQ07343 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
PDE4BQ07343 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC18.27■□□□□ 0.52
PDE4BQ07343 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
PDE4BQ07343 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
PDE4BQ07343 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
PDE4BQ07343 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC18.27■□□□□ 0.52
PDE4BQ07343 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC18.27■□□□□ 0.52
PDE4BQ07343 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
PDE4BQ07343 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC18.27■□□□□ 0.52
PDE4BQ07343 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PDE4BQ07343 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
PDE4BQ07343 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
PDE4BQ07343 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
PDE4BQ07343 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC18.27■□□□□ 0.52
PDE4BQ07343 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC18.27■□□□□ 0.52
PDE4BQ07343 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
PDE4BQ07343 GPR53P-205ENST00000457298 1084 ntBASIC18.27■□□□□ 0.52
PDE4BQ07343 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC18.27■□□□□ 0.52
PDE4BQ07343 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.52
PDE4BQ07343 USP32P1-208ENST00000506594 1164 ntBASIC18.27■□□□□ 0.52
PDE4BQ07343 SLC25A47P1-201ENST00000531577 414 ntBASIC18.27■□□□□ 0.52
PDE4BQ07343 KRT17P8-201ENST00000540749 863 ntBASIC18.27■□□□□ 0.52
PDE4BQ07343 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC18.27■□□□□ 0.52
PDE4BQ07343 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC18.27■□□□□ 0.52
PDE4BQ07343 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC18.27■□□□□ 0.52
PDE4BQ07343 BTNL10-201ENST00000595971 695 ntBASIC18.27■□□□□ 0.52
PDE4BQ07343 AC233724.13-201ENST00000598383 410 ntBASIC18.27■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 45.6 ms