Protein–RNA interactions for Protein: P59666

DEFA3, Neutrophil defensin 3, humanhuman

Predictions only

Length 94 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEFA3P59666 MYBBP1A-201ENST00000254718 4807 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
DEFA3P59666 CACNA1G-229ENST00000514181 6795 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
DEFA3P59666 EPAS1-201ENST00000263734 5166 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
DEFA3P59666 AC125611.4-201ENST00000553259 4166 ntTSL 2 BASIC13.64□□□□□ -0.23
DEFA3P59666 HOXA3-207ENST00000612286 3396 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
DEFA3P59666 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
DEFA3P59666 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
DEFA3P59666 USO1-201ENST00000264904 4135 ntTSL 2 BASIC13.64□□□□□ -0.23
DEFA3P59666 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
DEFA3P59666 SAMD4A-201ENST00000251091 6565 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
DEFA3P59666 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
DEFA3P59666 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
DEFA3P59666 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
DEFA3P59666 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
DEFA3P59666 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
DEFA3P59666 HCG4-201ENST00000418983 998 ntBASIC13.64□□□□□ -0.23
DEFA3P59666 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
DEFA3P59666 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC13.64□□□□□ -0.23
DEFA3P59666 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC13.64□□□□□ -0.23
DEFA3P59666 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC13.64□□□□□ -0.23
DEFA3P59666 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC13.64□□□□□ -0.23
DEFA3P59666 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC13.64□□□□□ -0.23
DEFA3P59666 FAM98A-201ENST00000238823 2816 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
DEFA3P59666 TSPEAR-AS2-202ENST00000354333 2422 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
DEFA3P59666 FAM109A-201ENST00000361483 3256 ntAPPRIS ALT2 TSL 3 BASIC13.64□□□□□ -0.23
DEFA3P59666 RERE-202ENST00000377464 6733 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
DEFA3P59666 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
DEFA3P59666 SLC4A5-205ENST00000394019 6348 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
DEFA3P59666 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC13.64□□□□□ -0.23
DEFA3P59666 ANO7-202ENST00000402430 2652 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
DEFA3P59666 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
DEFA3P59666 SMARCA4-204ENST00000444061 4938 ntAPPRIS ALT1 TSL 5 BASIC13.64□□□□□ -0.23
DEFA3P59666 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
DEFA3P59666 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC13.64□□□□□ -0.23
DEFA3P59666 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC13.63□□□□□ -0.23
DEFA3P59666 MIR9-3HG-201ENST00000536780 4778 ntTSL 3 BASIC13.63□□□□□ -0.23
DEFA3P59666 AP1B1-201ENST00000317368 3903 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
DEFA3P59666 MAN2B1-203ENST00000456935 3184 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
DEFA3P59666 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC13.63□□□□□ -0.23
DEFA3P59666 PPFIA4-203ENST00000367240 6434 ntAPPRIS P5 TSL 5 BASIC13.63□□□□□ -0.23
DEFA3P59666 MLX-202ENST00000346833 2334 ntAPPRIS ALT1 TSL 1 (best) BASIC13.63□□□□□ -0.23
DEFA3P59666 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
DEFA3P59666 CYTH2-203ENST00000427476 4606 ntAPPRIS ALT1 TSL 1 (best) BASIC13.63□□□□□ -0.23
DEFA3P59666 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
DEFA3P59666 SIRPA-202ENST00000358771 3996 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
DEFA3P59666 LRP8-203ENST00000354412 2553 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
DEFA3P59666 RPS6KA1-213ENST00000526792 2596 ntTSL 5 BASIC13.63□□□□□ -0.23
DEFA3P59666 MAPKAP1-204ENST00000373498 3131 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
DEFA3P59666 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC13.63□□□□□ -0.23
DEFA3P59666 CIPC-201ENST00000361786 4486 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
DEFA3P59666 TECPR1-204ENST00000447648 6564 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
DEFA3P59666 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC13.63□□□□□ -0.23
DEFA3P59666 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
DEFA3P59666 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
DEFA3P59666 MIR1238-201ENST00000408483 83 ntBASIC13.63□□□□□ -0.23
DEFA3P59666 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC13.63□□□□□ -0.23
DEFA3P59666 AC128676.1-201ENST00000454392 318 ntBASIC13.63□□□□□ -0.23
DEFA3P59666 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
DEFA3P59666 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
DEFA3P59666 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC13.63□□□□□ -0.23
DEFA3P59666 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
DEFA3P59666 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC13.63□□□□□ -0.23
DEFA3P59666 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC13.63□□□□□ -0.23
DEFA3P59666 COPE-211ENST00000600932 1144 ntTSL 5 BASIC13.63□□□□□ -0.23
DEFA3P59666 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC13.63□□□□□ -0.23
DEFA3P59666 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
DEFA3P59666 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
DEFA3P59666 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC13.63□□□□□ -0.23
DEFA3P59666 PROM2-201ENST00000317620 4728 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
DEFA3P59666 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
DEFA3P59666 TRPM2-201ENST00000300481 5627 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
DEFA3P59666 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
DEFA3P59666 BICDL2-204ENST00000573514 3519 ntTSL 2 BASIC13.63□□□□□ -0.23
DEFA3P59666 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC13.63□□□□□ -0.23
DEFA3P59666 PDE1C-205ENST00000396191 2952 ntAPPRIS ALT1 TSL 2 BASIC13.63□□□□□ -0.23
DEFA3P59666 PLCD1-204ENST00000463876 2963 ntAPPRIS ALT1 TSL 2 BASIC13.63□□□□□ -0.23
DEFA3P59666 PDK2-203ENST00000503176 3440 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
DEFA3P59666 KREMEN1-202ENST00000400335 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
DEFA3P59666 RAB11FIP1-202ENST00000330843 7811 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
DEFA3P59666 EPS8L3-202ENST00000361965 1971 ntAPPRIS ALT1 TSL 1 (best) BASIC13.63□□□□□ -0.23
DEFA3P59666 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
DEFA3P59666 TRAF3-208ENST00000560371 7640 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
DEFA3P59666 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
DEFA3P59666 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC13.63□□□□□ -0.23
DEFA3P59666 RRAGD-201ENST00000359203 4042 ntTSL 2 BASIC13.63□□□□□ -0.23
DEFA3P59666 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
DEFA3P59666 PCDHGA3-203ENST00000619750 2695 ntAPPRIS ALT2 BASIC13.63□□□□□ -0.23
DEFA3P59666 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
DEFA3P59666 RELA-227ENST00000615805 2236 ntTSL 5 BASIC13.63□□□□□ -0.23
DEFA3P59666 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
DEFA3P59666 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC13.63□□□□□ -0.23
DEFA3P59666 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
DEFA3P59666 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC13.63□□□□□ -0.23
DEFA3P59666 AL590644.1-201ENST00000412427 4676 ntTSL 4 BASIC13.63□□□□□ -0.23
DEFA3P59666 C7orf57-204ENST00000435376 1925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
DEFA3P59666 C7orf57-206ENST00000539619 1927 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
DEFA3P59666 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC13.62□□□□□ -0.23
DEFA3P59666 SLC46A1-207ENST00000612814 6376 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
DEFA3P59666 GPR68-204ENST00000535815 2859 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
DEFA3P59666 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 68.2 ms