Protein–RNA interactions for Protein: P50747

HLCS, Biotin--protein ligase, humanhuman

Predictions only

Length 726 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLCSP50747 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
HLCSP50747 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
HLCSP50747 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
HLCSP50747 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
HLCSP50747 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
HLCSP50747 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
HLCSP50747 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
HLCSP50747 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
HLCSP50747 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC14.89□□□□□ -0.03
HLCSP50747 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
HLCSP50747 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
HLCSP50747 AC005840.4-201ENST00000541242 2494 ntBASIC14.89□□□□□ -0.03
HLCSP50747 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
HLCSP50747 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
HLCSP50747 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC14.89□□□□□ -0.03
HLCSP50747 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
HLCSP50747 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
HLCSP50747 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC14.89□□□□□ -0.03
HLCSP50747 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
HLCSP50747 C18orf15-201ENST00000623680 2534 ntBASIC14.89□□□□□ -0.03
HLCSP50747 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC14.89□□□□□ -0.03
HLCSP50747 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC14.89□□□□□ -0.03
HLCSP50747 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
HLCSP50747 AL035633.1-201ENST00000406139 838 ntBASIC14.89□□□□□ -0.03
HLCSP50747 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC14.89□□□□□ -0.03
HLCSP50747 MRPS18AP1-201ENST00000414458 589 ntBASIC14.89□□□□□ -0.03
HLCSP50747 AL080243.2-201ENST00000418783 582 ntBASIC14.89□□□□□ -0.03
HLCSP50747 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
HLCSP50747 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC14.89□□□□□ -0.03
HLCSP50747 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC14.89□□□□□ -0.03
HLCSP50747 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC14.89□□□□□ -0.03
HLCSP50747 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC14.89□□□□□ -0.03
HLCSP50747 MIR4321-201ENST00000592276 80 ntBASIC14.89□□□□□ -0.03
HLCSP50747 AC008761.3-201ENST00000624803 892 ntBASIC14.89□□□□□ -0.03
HLCSP50747 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
HLCSP50747 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
HLCSP50747 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
HLCSP50747 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
HLCSP50747 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC14.89□□□□□ -0.03
HLCSP50747 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
HLCSP50747 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
HLCSP50747 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
HLCSP50747 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
HLCSP50747 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
HLCSP50747 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC14.89□□□□□ -0.03
HLCSP50747 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC14.89□□□□□ -0.03
HLCSP50747 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
HLCSP50747 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
HLCSP50747 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
HLCSP50747 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
HLCSP50747 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
HLCSP50747 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
HLCSP50747 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
HLCSP50747 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
HLCSP50747 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC14.88□□□□□ -0.03
HLCSP50747 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
HLCSP50747 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
HLCSP50747 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
HLCSP50747 AC041040.2-201ENST00000622926 2899 ntBASIC14.88□□□□□ -0.03
HLCSP50747 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
HLCSP50747 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
HLCSP50747 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
HLCSP50747 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC14.88□□□□□ -0.03
HLCSP50747 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
HLCSP50747 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
HLCSP50747 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
HLCSP50747 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC14.88□□□□□ -0.03
HLCSP50747 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
HLCSP50747 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
HLCSP50747 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
HLCSP50747 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
HLCSP50747 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
HLCSP50747 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
HLCSP50747 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
HLCSP50747 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
HLCSP50747 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
HLCSP50747 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
HLCSP50747 MIR661-201ENST00000384842 89 ntBASIC14.88□□□□□ -0.03
HLCSP50747 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
HLCSP50747 COX20P2-201ENST00000452636 358 ntBASIC14.88□□□□□ -0.03
HLCSP50747 AC009477.1-201ENST00000452936 217 ntBASIC14.88□□□□□ -0.03
HLCSP50747 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC14.88□□□□□ -0.03
HLCSP50747 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
HLCSP50747 POLD4-211ENST00000539074 714 ntTSL 3 BASIC14.88□□□□□ -0.03
HLCSP50747 PAM16-215ENST00000577031 548 ntTSL 4 BASIC14.88□□□□□ -0.03
HLCSP50747 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
HLCSP50747 YTHDF3-AS1-201ENST00000603538 718 ntBASIC14.88□□□□□ -0.03
HLCSP50747 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC14.88□□□□□ -0.03
HLCSP50747 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
HLCSP50747 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
HLCSP50747 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
HLCSP50747 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC14.88□□□□□ -0.03
HLCSP50747 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
HLCSP50747 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
HLCSP50747 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
HLCSP50747 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
HLCSP50747 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC14.88□□□□□ -0.03
HLCSP50747 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC14.88□□□□□ -0.03
HLCSP50747 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
HLCSP50747 AMT-204ENST00000427987 1646 ntTSL 5 BASIC14.88□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms