Protein–RNA interactions for Protein: P46098

HTR3A, 5-hydroxytryptamine receptor 3A, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR3AP46098 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC14.4□□□□□ -0.1
HTR3AP46098 ILF3-AS1-201ENST00000591501 1983 ntBASIC14.4□□□□□ -0.1
HTR3AP46098 KRT18P28-201ENST00000453838 1332 ntBASIC14.4□□□□□ -0.1
HTR3AP46098 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
HTR3AP46098 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC14.39□□□□□ -0.11
HTR3AP46098 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC14.39□□□□□ -0.11
HTR3AP46098 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC14.39□□□□□ -0.11
HTR3AP46098 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC14.39□□□□□ -0.11
HTR3AP46098 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
HTR3AP46098 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC14.39□□□□□ -0.11
HTR3AP46098 AL390755.1-201ENST00000623716 2027 ntBASIC14.39□□□□□ -0.11
HTR3AP46098 AC018892.3-201ENST00000623986 2499 ntBASIC14.39□□□□□ -0.11
HTR3AP46098 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC14.39□□□□□ -0.11
HTR3AP46098 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC14.39□□□□□ -0.11
HTR3AP46098 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC14.39□□□□□ -0.11
HTR3AP46098 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC14.39□□□□□ -0.11
HTR3AP46098 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
HTR3AP46098 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
HTR3AP46098 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
HTR3AP46098 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
HTR3AP46098 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
HTR3AP46098 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
HTR3AP46098 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
HTR3AP46098 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
HTR3AP46098 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
HTR3AP46098 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
HTR3AP46098 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
HTR3AP46098 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC14.39□□□□□ -0.11
HTR3AP46098 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
HTR3AP46098 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC14.39□□□□□ -0.11
HTR3AP46098 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC14.39□□□□□ -0.11
HTR3AP46098 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC14.39□□□□□ -0.11
HTR3AP46098 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC14.39□□□□□ -0.11
HTR3AP46098 HNRNPUP1-201ENST00000554987 333 ntBASIC14.39□□□□□ -0.11
HTR3AP46098 AC051619.7-201ENST00000568314 623 ntBASIC14.39□□□□□ -0.11
HTR3AP46098 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
HTR3AP46098 AC006538.3-201ENST00000612495 578 ntBASIC14.39□□□□□ -0.11
HTR3AP46098 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC14.39□□□□□ -0.11
HTR3AP46098 HADH-212ENST00000638621 741 ntTSL 5 BASIC14.39□□□□□ -0.11
HTR3AP46098 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC14.39□□□□□ -0.11
HTR3AP46098 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
HTR3AP46098 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
HTR3AP46098 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC14.39□□□□□ -0.11
HTR3AP46098 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC14.39□□□□□ -0.11
HTR3AP46098 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
HTR3AP46098 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
HTR3AP46098 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
HTR3AP46098 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
HTR3AP46098 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC14.39□□□□□ -0.11
HTR3AP46098 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
HTR3AP46098 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC14.39□□□□□ -0.11
HTR3AP46098 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC14.39□□□□□ -0.11
HTR3AP46098 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC14.38□□□□□ -0.11
HTR3AP46098 GRM7-203ENST00000389336 2901 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
HTR3AP46098 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
HTR3AP46098 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
HTR3AP46098 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
HTR3AP46098 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
HTR3AP46098 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC14.38□□□□□ -0.11
HTR3AP46098 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
HTR3AP46098 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
HTR3AP46098 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
HTR3AP46098 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
HTR3AP46098 AC020658.6-201ENST00000623564 1870 ntBASIC14.38□□□□□ -0.11
HTR3AP46098 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC14.38□□□□□ -0.11
HTR3AP46098 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
HTR3AP46098 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC14.38□□□□□ -0.11
HTR3AP46098 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
HTR3AP46098 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
HTR3AP46098 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
HTR3AP46098 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
HTR3AP46098 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
HTR3AP46098 AL080243.2-201ENST00000418783 582 ntBASIC14.38□□□□□ -0.11
HTR3AP46098 PON3-203ENST00000427422 894 ntTSL 3 BASIC14.38□□□□□ -0.11
HTR3AP46098 HIST3H2BA-201ENST00000436555 524 ntBASIC14.38□□□□□ -0.11
HTR3AP46098 LY6E-204ENST00000519546 971 ntTSL 2 BASIC14.38□□□□□ -0.11
HTR3AP46098 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC14.38□□□□□ -0.11
HTR3AP46098 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
HTR3AP46098 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC14.38□□□□□ -0.11
HTR3AP46098 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC14.38□□□□□ -0.11
HTR3AP46098 GPALPP1-207ENST00000611650 899 ntBASIC14.38□□□□□ -0.11
HTR3AP46098 AC073592.8-201ENST00000624126 511 ntBASIC14.38□□□□□ -0.11
HTR3AP46098 AL033527.5-202ENST00000641632 1098 ntBASIC14.38□□□□□ -0.11
HTR3AP46098 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
HTR3AP46098 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
HTR3AP46098 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
HTR3AP46098 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
HTR3AP46098 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
HTR3AP46098 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC14.38□□□□□ -0.11
HTR3AP46098 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC14.38□□□□□ -0.11
HTR3AP46098 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
HTR3AP46098 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
HTR3AP46098 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
HTR3AP46098 MARS-201ENST00000262027 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
HTR3AP46098 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
HTR3AP46098 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
HTR3AP46098 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC14.38□□□□□ -0.11
HTR3AP46098 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC14.38□□□□□ -0.11
HTR3AP46098 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
HTR3AP46098 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms