Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 UMODL1-204ENST00000400427 5442 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
NKX2-1P43699 PEG13-201ENST00000631594 5667 ntBASIC12.77□□□□□ -0.37
NKX2-1P43699 CAND2-201ENST00000295989 4429 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
NKX2-1P43699 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
NKX2-1P43699 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
NKX2-1P43699 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC12.77□□□□□ -0.37
NKX2-1P43699 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
NKX2-1P43699 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
NKX2-1P43699 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC12.77□□□□□ -0.37
NKX2-1P43699 RPL5P21-201ENST00000404620 815 ntBASIC12.77□□□□□ -0.37
NKX2-1P43699 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC12.77□□□□□ -0.37
NKX2-1P43699 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC12.77□□□□□ -0.37
NKX2-1P43699 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC12.77□□□□□ -0.37
NKX2-1P43699 MIR4751-201ENST00000578027 74 ntBASIC12.77□□□□□ -0.37
NKX2-1P43699 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
NKX2-1P43699 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC12.77□□□□□ -0.37
NKX2-1P43699 ADAM11-201ENST00000200557 4571 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
NKX2-1P43699 ACE3P-201ENST00000423435 1973 ntBASIC12.77□□□□□ -0.37
NKX2-1P43699 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC12.77□□□□□ -0.37
NKX2-1P43699 BCL9L-201ENST00000334801 10005 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
NKX2-1P43699 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC12.77□□□□□ -0.37
NKX2-1P43699 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC12.77□□□□□ -0.37
NKX2-1P43699 CEMIP-201ENST00000220244 7226 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
NKX2-1P43699 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC12.77□□□□□ -0.37
NKX2-1P43699 AFDN-211ENST00000447894 5475 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
NKX2-1P43699 AL031595.1-201ENST00000623969 4709 ntBASIC12.77□□□□□ -0.37
NKX2-1P43699 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
NKX2-1P43699 AGRN-210ENST00000620552 7394 ntTSL 5 BASIC12.77□□□□□ -0.37
NKX2-1P43699 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
NKX2-1P43699 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
NKX2-1P43699 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
NKX2-1P43699 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC12.76□□□□□ -0.37
NKX2-1P43699 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC12.76□□□□□ -0.37
NKX2-1P43699 COL22A1-201ENST00000303045 6346 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
NKX2-1P43699 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
NKX2-1P43699 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
NKX2-1P43699 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
NKX2-1P43699 CCNJ-201ENST00000265992 4115 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
NKX2-1P43699 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
NKX2-1P43699 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
NKX2-1P43699 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
NKX2-1P43699 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
NKX2-1P43699 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
NKX2-1P43699 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC12.76□□□□□ -0.37
NKX2-1P43699 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
NKX2-1P43699 AKR1C7P-201ENST00000305623 895 ntBASIC12.76□□□□□ -0.37
NKX2-1P43699 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
NKX2-1P43699 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
NKX2-1P43699 DDT-204ENST00000404092 805 ntTSL 3 BASIC12.76□□□□□ -0.37
NKX2-1P43699 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC12.76□□□□□ -0.37
NKX2-1P43699 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC12.76□□□□□ -0.37
NKX2-1P43699 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
NKX2-1P43699 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
NKX2-1P43699 CD7-202ENST00000578509 925 ntTSL 3 BASIC12.76□□□□□ -0.37
NKX2-1P43699 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC12.76□□□□□ -0.37
NKX2-1P43699 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC12.76□□□□□ -0.37
NKX2-1P43699 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC12.76□□□□□ -0.37
NKX2-1P43699 AC012313.10-201ENST00000623509 926 ntBASIC12.76□□□□□ -0.37
NKX2-1P43699 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC12.76□□□□□ -0.37
NKX2-1P43699 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
NKX2-1P43699 GRSF1-201ENST00000254799 6666 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
NKX2-1P43699 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
NKX2-1P43699 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC12.76□□□□□ -0.37
NKX2-1P43699 DNMT3B-204ENST00000353855 4237 ntTSL 5 BASIC12.76□□□□□ -0.37
NKX2-1P43699 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC12.76□□□□□ -0.37
NKX2-1P43699 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
NKX2-1P43699 KLHL21-201ENST00000377658 4487 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
NKX2-1P43699 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC12.76□□□□□ -0.37
NKX2-1P43699 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC12.76□□□□□ -0.37
NKX2-1P43699 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
NKX2-1P43699 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC12.76□□□□□ -0.37
NKX2-1P43699 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC12.76□□□□□ -0.37
NKX2-1P43699 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
NKX2-1P43699 BEND3P1-201ENST00000421591 1944 ntBASIC12.76□□□□□ -0.37
NKX2-1P43699 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC12.76□□□□□ -0.37
NKX2-1P43699 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
NKX2-1P43699 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
NKX2-1P43699 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
NKX2-1P43699 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
NKX2-1P43699 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
NKX2-1P43699 RSBN1-201ENST00000261441 6621 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
NKX2-1P43699 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC12.76□□□□□ -0.37
NKX2-1P43699 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
NKX2-1P43699 DMBT1P1-203ENST00000636837 4628 ntBASIC12.76□□□□□ -0.37
NKX2-1P43699 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
NKX2-1P43699 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
NKX2-1P43699 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
NKX2-1P43699 RIC8B-202ENST00000392837 5135 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
NKX2-1P43699 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
NKX2-1P43699 FAM13B-201ENST00000033079 5465 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
NKX2-1P43699 SERTAD2-201ENST00000313349 5549 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
NKX2-1P43699 SUCO-201ENST00000263688 5556 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
NKX2-1P43699 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC12.75□□□□□ -0.37
NKX2-1P43699 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC12.75□□□□□ -0.37
NKX2-1P43699 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC12.75□□□□□ -0.37
NKX2-1P43699 ARHGAP27-203ENST00000428638 4242 ntAPPRIS P2 TSL 5 BASIC12.75□□□□□ -0.37
NKX2-1P43699 PHLDB2-204ENST00000431670 6127 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
NKX2-1P43699 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
NKX2-1P43699 SETD1A-201ENST00000262519 6451 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
NKX2-1P43699 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 120.9 ms