Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
COL15A1P39059 AC245884.6-201ENST00000515672 1067 ntBASIC19.38■□□□□ 0.69
COL15A1P39059 AC022217.1-201ENST00000521069 738 ntBASIC19.38■□□□□ 0.69
COL15A1P39059 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC19.38■□□□□ 0.69
COL15A1P39059 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC19.38■□□□□ 0.69
COL15A1P39059 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC19.38■□□□□ 0.69
COL15A1P39059 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC19.38■□□□□ 0.69
COL15A1P39059 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC19.38■□□□□ 0.69
COL15A1P39059 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC19.38■□□□□ 0.69
COL15A1P39059 PLEKHB2-211ENST00000628582 1297 ntTSL 2 BASIC19.38■□□□□ 0.69
COL15A1P39059 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
COL15A1P39059 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
COL15A1P39059 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
COL15A1P39059 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
COL15A1P39059 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC19.38■□□□□ 0.69
COL15A1P39059 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
COL15A1P39059 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
COL15A1P39059 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
COL15A1P39059 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
COL15A1P39059 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
COL15A1P39059 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
COL15A1P39059 RAB1A-201ENST00000398529 1198 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
COL15A1P39059 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC19.37■□□□□ 0.69
COL15A1P39059 AL136309.1-201ENST00000403917 691 ntBASIC19.37■□□□□ 0.69
COL15A1P39059 AC016825.1-201ENST00000433600 778 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
COL15A1P39059 AC100850.1-201ENST00000506768 649 ntBASIC19.37■□□□□ 0.69
COL15A1P39059 AC022616.1-201ENST00000518688 554 ntBASIC19.37■□□□□ 0.69
COL15A1P39059 AP003419.2-201ENST00000543494 711 ntAPPRIS P1 TSL 3 BASIC19.37■□□□□ 0.69
COL15A1P39059 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC19.37■□□□□ 0.69
COL15A1P39059 AL645939.5-201ENST00000606834 243 ntBASIC19.37■□□□□ 0.69
COL15A1P39059 STK33-217ENST00000534493 1895 ntTSL 2 BASIC19.37■□□□□ 0.69
COL15A1P39059 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
COL15A1P39059 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC19.37■□□□□ 0.69
COL15A1P39059 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC19.37■□□□□ 0.69
COL15A1P39059 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC19.37■□□□□ 0.69
COL15A1P39059 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC19.37■□□□□ 0.69
COL15A1P39059 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
COL15A1P39059 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
COL15A1P39059 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
COL15A1P39059 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
COL15A1P39059 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC19.37■□□□□ 0.69
COL15A1P39059 CHAT-212ENST00000640822 1412 ntTSL 5 BASIC19.36■□□□□ 0.69
COL15A1P39059 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC19.36■□□□□ 0.69
COL15A1P39059 AC007950.2-201ENST00000615045 2347 ntBASIC19.36■□□□□ 0.69
COL15A1P39059 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC19.36■□□□□ 0.69
COL15A1P39059 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
COL15A1P39059 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
COL15A1P39059 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
COL15A1P39059 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
COL15A1P39059 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC19.36■□□□□ 0.69
COL15A1P39059 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
COL15A1P39059 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
COL15A1P39059 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC19.36■□□□□ 0.69
COL15A1P39059 PTPA-217ENST00000434095 870 ntTSL 2 BASIC19.36■□□□□ 0.69
COL15A1P39059 RN7SL720P-201ENST00000488178 304 ntBASIC19.36■□□□□ 0.69
COL15A1P39059 LEF1-AS1-204ENST00000508266 559 ntTSL 4 BASIC19.36■□□□□ 0.69
COL15A1P39059 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC19.36■□□□□ 0.69
COL15A1P39059 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC19.36■□□□□ 0.69
COL15A1P39059 AC100858.3-202ENST00000533496 553 ntTSL 4 BASIC19.36■□□□□ 0.69
COL15A1P39059 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
COL15A1P39059 AL603764.1-201ENST00000636452 321 ntBASIC19.36■□□□□ 0.69
COL15A1P39059 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC19.36■□□□□ 0.69
COL15A1P39059 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
COL15A1P39059 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC19.36■□□□□ 0.69
COL15A1P39059 AC009090.5-201ENST00000624886 2285 ntBASIC19.36■□□□□ 0.69
COL15A1P39059 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
COL15A1P39059 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
COL15A1P39059 HLA-DQB2-231ENST00000435145 2026 ntBASIC19.35■□□□□ 0.69
COL15A1P39059 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC19.35■□□□□ 0.69
COL15A1P39059 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
COL15A1P39059 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
COL15A1P39059 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
COL15A1P39059 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
COL15A1P39059 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
COL15A1P39059 AL451042.2-201ENST00000424774 904 ntTSL 2 BASIC19.35■□□□□ 0.69
COL15A1P39059 PENK-202ENST00000451791 1029 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
COL15A1P39059 RN7SL11P-201ENST00000471305 293 ntBASIC19.35■□□□□ 0.69
COL15A1P39059 IGFLR1-211ENST00000592889 782 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
COL15A1P39059 L34079.1-201ENST00000594374 393 ntAPPRIS P1 TSL 3 BASIC19.35■□□□□ 0.69
COL15A1P39059 AC022748.3-201ENST00000621828 275 ntBASIC19.35■□□□□ 0.69
COL15A1P39059 CU633904.3-201ENST00000624042 1029 ntBASIC19.35■□□□□ 0.69
COL15A1P39059 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
COL15A1P39059 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC19.35■□□□□ 0.69
COL15A1P39059 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
COL15A1P39059 AC055811.4-201ENST00000624039 1754 ntBASIC19.35■□□□□ 0.69
COL15A1P39059 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC19.35■□□□□ 0.69
COL15A1P39059 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC19.35■□□□□ 0.69
COL15A1P39059 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
COL15A1P39059 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC19.35■□□□□ 0.69
COL15A1P39059 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC19.35■□□□□ 0.69
COL15A1P39059 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC19.35■□□□□ 0.69
COL15A1P39059 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
COL15A1P39059 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
COL15A1P39059 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC19.35■□□□□ 0.69
COL15A1P39059 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
COL15A1P39059 CLUHP2-201ENST00000426660 1303 ntBASIC19.34■□□□□ 0.69
COL15A1P39059 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC19.34■□□□□ 0.69
COL15A1P39059 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
COL15A1P39059 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
COL15A1P39059 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 52.8 ms