Protein–RNA interactions for Protein: P35558

PCK1, Phosphoenolpyruvate carboxykinase, cytosolic [GTP], humanhuman

Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCK1P35558 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PCK1P35558 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PCK1P35558 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PCK1P35558 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PCK1P35558 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC16.41■□□□□ 0.22
PCK1P35558 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PCK1P35558 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PCK1P35558 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PCK1P35558 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PCK1P35558 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PCK1P35558 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PCK1P35558 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC16.4■□□□□ 0.22
PCK1P35558 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PCK1P35558 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PCK1P35558 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PCK1P35558 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
PCK1P35558 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
PCK1P35558 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC16.4■□□□□ 0.22
PCK1P35558 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PCK1P35558 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PCK1P35558 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PCK1P35558 BAD-202ENST00000394531 631 ntTSL 3 BASIC16.4■□□□□ 0.22
PCK1P35558 AC107890.1-201ENST00000422478 521 ntBASIC16.4■□□□□ 0.22
PCK1P35558 USP40-206ENST00000443711 628 ntTSL 2 BASIC16.4■□□□□ 0.22
PCK1P35558 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC16.4■□□□□ 0.22
PCK1P35558 LY6E-204ENST00000519546 971 ntTSL 2 BASIC16.4■□□□□ 0.22
PCK1P35558 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC16.4■□□□□ 0.22
PCK1P35558 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC16.4■□□□□ 0.22
PCK1P35558 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC16.4■□□□□ 0.22
PCK1P35558 BAD-207ENST00000544785 525 ntTSL 3 BASIC16.4■□□□□ 0.22
PCK1P35558 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PCK1P35558 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
PCK1P35558 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC16.4■□□□□ 0.22
PCK1P35558 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC16.4■□□□□ 0.22
PCK1P35558 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PCK1P35558 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
PCK1P35558 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC16.4■□□□□ 0.22
PCK1P35558 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC16.4■□□□□ 0.22
PCK1P35558 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PCK1P35558 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC16.4■□□□□ 0.22
PCK1P35558 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PCK1P35558 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PCK1P35558 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
PCK1P35558 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PCK1P35558 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC16.4■□□□□ 0.22
PCK1P35558 AC126365.1-201ENST00000578585 1514 ntBASIC16.4■□□□□ 0.22
PCK1P35558 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC16.4■□□□□ 0.22
PCK1P35558 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC16.39■□□□□ 0.22
PCK1P35558 KRT8P44-201ENST00000441609 1350 ntBASIC16.39■□□□□ 0.21
PCK1P35558 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
PCK1P35558 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC16.39■□□□□ 0.21
PCK1P35558 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
PCK1P35558 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC16.39■□□□□ 0.21
PCK1P35558 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC16.39■□□□□ 0.21
PCK1P35558 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PCK1P35558 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
PCK1P35558 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
PCK1P35558 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC16.39■□□□□ 0.21
PCK1P35558 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PCK1P35558 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
PCK1P35558 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
PCK1P35558 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC16.39■□□□□ 0.21
PCK1P35558 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC16.39■□□□□ 0.21
PCK1P35558 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC16.39■□□□□ 0.21
PCK1P35558 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
PCK1P35558 SLED1-202ENST00000512051 380 ntBASIC16.39■□□□□ 0.21
PCK1P35558 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC16.39■□□□□ 0.21
PCK1P35558 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC16.39■□□□□ 0.21
PCK1P35558 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
PCK1P35558 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC16.39■□□□□ 0.21
PCK1P35558 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC16.39■□□□□ 0.21
PCK1P35558 AL512361.1-201ENST00000554200 418 ntBASIC16.39■□□□□ 0.21
PCK1P35558 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC16.39■□□□□ 0.21
PCK1P35558 AC010336.2-201ENST00000564226 506 ntBASIC16.39■□□□□ 0.21
PCK1P35558 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
PCK1P35558 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC16.39■□□□□ 0.21
PCK1P35558 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC16.39■□□□□ 0.21
PCK1P35558 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC16.39■□□□□ 0.21
PCK1P35558 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC16.39■□□□□ 0.21
PCK1P35558 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC16.39■□□□□ 0.21
PCK1P35558 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PCK1P35558 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC16.39■□□□□ 0.21
PCK1P35558 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
PCK1P35558 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
PCK1P35558 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC16.39■□□□□ 0.21
PCK1P35558 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PCK1P35558 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PCK1P35558 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
PCK1P35558 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC16.39■□□□□ 0.21
PCK1P35558 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
PCK1P35558 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
PCK1P35558 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC16.39■□□□□ 0.21
PCK1P35558 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PCK1P35558 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
PCK1P35558 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
PCK1P35558 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
PCK1P35558 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC16.38■□□□□ 0.21
PCK1P35558 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
PCK1P35558 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
PCK1P35558 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms