Protein–RNA interactions for Protein: P35527

KRT9, Keratin, type I cytoskeletal 9, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT9P35527 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC17.02■□□□□ 0.32
KRT9P35527 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC17.02■□□□□ 0.32
KRT9P35527 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
KRT9P35527 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
KRT9P35527 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
KRT9P35527 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
KRT9P35527 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC17.02■□□□□ 0.32
KRT9P35527 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
KRT9P35527 AP001059.3-201ENST00000619053 235 ntBASIC17.02■□□□□ 0.32
KRT9P35527 CICP11-201ENST00000434745 2827 ntBASIC17.02■□□□□ 0.32
KRT9P35527 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
KRT9P35527 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
KRT9P35527 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
KRT9P35527 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
KRT9P35527 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.31
KRT9P35527 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
KRT9P35527 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC17.02■□□□□ 0.31
KRT9P35527 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
KRT9P35527 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
KRT9P35527 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
KRT9P35527 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
KRT9P35527 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC17.02■□□□□ 0.31
KRT9P35527 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
KRT9P35527 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.31
KRT9P35527 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
KRT9P35527 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
KRT9P35527 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC17.02■□□□□ 0.31
KRT9P35527 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC17.01■□□□□ 0.31
KRT9P35527 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC17.01■□□□□ 0.31
KRT9P35527 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
KRT9P35527 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
KRT9P35527 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
KRT9P35527 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
KRT9P35527 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
KRT9P35527 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
KRT9P35527 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
KRT9P35527 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
KRT9P35527 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
KRT9P35527 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
KRT9P35527 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
KRT9P35527 USP28-214ENST00000545540 3431 ntTSL 2 BASIC17.01■□□□□ 0.31
KRT9P35527 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
KRT9P35527 C1R-202ENST00000536053 2347 ntTSL 2 BASIC17.01■□□□□ 0.31
KRT9P35527 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
KRT9P35527 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
KRT9P35527 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
KRT9P35527 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
KRT9P35527 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
KRT9P35527 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
KRT9P35527 SPDYE7P-202ENST00000420373 878 ntBASIC17.01■□□□□ 0.31
KRT9P35527 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC17.01■□□□□ 0.31
KRT9P35527 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
KRT9P35527 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC17.01■□□□□ 0.31
KRT9P35527 DAD1-205ENST00000543337 501 ntTSL 3 BASIC17.01■□□□□ 0.31
KRT9P35527 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC17.01■□□□□ 0.31
KRT9P35527 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
KRT9P35527 MIR6080-201ENST00000617359 66 ntBASIC17.01■□□□□ 0.31
KRT9P35527 AL691403.2-201ENST00000618460 490 ntBASIC17.01■□□□□ 0.31
KRT9P35527 AC023511.2-201ENST00000618803 211 ntBASIC17.01■□□□□ 0.31
KRT9P35527 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
KRT9P35527 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC17.01■□□□□ 0.31
KRT9P35527 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
KRT9P35527 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
KRT9P35527 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
KRT9P35527 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
KRT9P35527 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
KRT9P35527 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
KRT9P35527 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
KRT9P35527 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
KRT9P35527 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
KRT9P35527 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
KRT9P35527 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC17.01■□□□□ 0.31
KRT9P35527 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
KRT9P35527 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
KRT9P35527 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC17.01■□□□□ 0.31
KRT9P35527 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
KRT9P35527 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
KRT9P35527 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC17■□□□□ 0.31
KRT9P35527 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC17■□□□□ 0.31
KRT9P35527 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC17■□□□□ 0.31
KRT9P35527 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC17■□□□□ 0.31
KRT9P35527 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC17■□□□□ 0.31
KRT9P35527 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC17■□□□□ 0.31
KRT9P35527 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC17■□□□□ 0.31
KRT9P35527 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC17■□□□□ 0.31
KRT9P35527 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC17■□□□□ 0.31
KRT9P35527 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC17■□□□□ 0.31
KRT9P35527 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
KRT9P35527 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
KRT9P35527 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
KRT9P35527 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
KRT9P35527 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
KRT9P35527 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC17■□□□□ 0.31
KRT9P35527 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
KRT9P35527 RPL5P21-201ENST00000404620 815 ntBASIC17■□□□□ 0.31
KRT9P35527 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC17■□□□□ 0.31
KRT9P35527 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC17■□□□□ 0.31
KRT9P35527 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC17■□□□□ 0.31
KRT9P35527 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC17■□□□□ 0.31
KRT9P35527 LITAF-210ENST00000571976 548 ntTSL 2 BASIC17■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms