Protein–RNA interactions for Protein: P20338

RAB4A, Ras-related protein Rab-4A, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB4AP20338 NTN4-201ENST00000343702 3615 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
RAB4AP20338 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC11.99□□□□□ -0.49
RAB4AP20338 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC11.99□□□□□ -0.49
RAB4AP20338 AC089987.1-201ENST00000551654 2209 ntBASIC11.99□□□□□ -0.49
RAB4AP20338 SELENON-201ENST00000354177 4227 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
RAB4AP20338 SLC26A6-207ENST00000420764 2630 ntAPPRIS ALT1 TSL 1 (best) BASIC11.99□□□□□ -0.49
RAB4AP20338 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
RAB4AP20338 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
RAB4AP20338 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
RAB4AP20338 URGCP-201ENST00000336086 5658 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
RAB4AP20338 INHBA-201ENST00000242208 6064 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
RAB4AP20338 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
RAB4AP20338 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
RAB4AP20338 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
RAB4AP20338 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC11.99□□□□□ -0.49
RAB4AP20338 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC11.99□□□□□ -0.49
RAB4AP20338 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC11.99□□□□□ -0.49
RAB4AP20338 MPDU1-223ENST00000582151 728 ntBASIC11.99□□□□□ -0.49
RAB4AP20338 SIGLEC29P-201ENST00000599873 1114 ntBASIC11.99□□□□□ -0.49
RAB4AP20338 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
RAB4AP20338 TRPV1-206ENST00000571088 4105 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
RAB4AP20338 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC11.99□□□□□ -0.49
RAB4AP20338 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC11.99□□□□□ -0.49
RAB4AP20338 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC11.99□□□□□ -0.49
RAB4AP20338 LGALS8-AS1-201ENST00000487567 1457 ntBASIC11.99□□□□□ -0.49
RAB4AP20338 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC11.99□□□□□ -0.49
RAB4AP20338 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC11.99□□□□□ -0.49
RAB4AP20338 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
RAB4AP20338 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
RAB4AP20338 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC11.99□□□□□ -0.49
RAB4AP20338 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
RAB4AP20338 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
RAB4AP20338 AC140479.7-201ENST00000636301 2332 ntBASIC11.99□□□□□ -0.49
RAB4AP20338 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
RAB4AP20338 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC11.99□□□□□ -0.49
RAB4AP20338 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC11.99□□□□□ -0.49
RAB4AP20338 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
RAB4AP20338 UGT3A1-201ENST00000274278 5122 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
RAB4AP20338 ST3GAL2-202ENST00000393640 8872 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
RAB4AP20338 CCSER2-203ENST00000372088 7657 ntTSL 2 BASIC11.98□□□□□ -0.49
RAB4AP20338 RPS27L-201ENST00000330964 6434 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
RAB4AP20338 SSBP2-220ENST00000615665 4465 ntTSL 5 BASIC11.98□□□□□ -0.49
RAB4AP20338 SNAP91-215ENST00000521743 4263 ntAPPRIS P2 TSL 5 BASIC11.98□□□□□ -0.49
RAB4AP20338 KCNN1-201ENST00000222249 3625 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
RAB4AP20338 PBXIP1-202ENST00000368463 3212 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
RAB4AP20338 LINC01750-202ENST00000438293 3068 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
RAB4AP20338 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
RAB4AP20338 LPO-203ENST00000421678 2729 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
RAB4AP20338 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
RAB4AP20338 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
RAB4AP20338 CLCN4-201ENST00000380829 2418 ntTSL 5 BASIC11.98□□□□□ -0.49
RAB4AP20338 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
RAB4AP20338 AC083964.2-201ENST00000623988 2396 ntBASIC11.98□□□□□ -0.49
RAB4AP20338 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC11.98□□□□□ -0.49
RAB4AP20338 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
RAB4AP20338 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
RAB4AP20338 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC11.98□□□□□ -0.49
RAB4AP20338 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC11.98□□□□□ -0.49
RAB4AP20338 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
RAB4AP20338 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC11.98□□□□□ -0.49
RAB4AP20338 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
RAB4AP20338 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC11.98□□□□□ -0.49
RAB4AP20338 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
RAB4AP20338 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
RAB4AP20338 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
RAB4AP20338 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
RAB4AP20338 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC11.98□□□□□ -0.49
RAB4AP20338 UNC13B-202ENST00000378496 5063 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
RAB4AP20338 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC11.98□□□□□ -0.49
RAB4AP20338 UMODL1-205ENST00000408910 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
RAB4AP20338 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC11.98□□□□□ -0.49
RAB4AP20338 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC11.98□□□□□ -0.49
RAB4AP20338 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC11.98□□□□□ -0.49
RAB4AP20338 ADAMTS13-202ENST00000356589 4349 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
RAB4AP20338 AL590787.1-201ENST00000568856 1315 ntBASIC11.98□□□□□ -0.49
RAB4AP20338 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
RAB4AP20338 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC11.98□□□□□ -0.49
RAB4AP20338 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
RAB4AP20338 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC11.98□□□□□ -0.49
RAB4AP20338 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC11.98□□□□□ -0.49
RAB4AP20338 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC11.98□□□□□ -0.49
RAB4AP20338 S100A2-206ENST00000497140 697 ntTSL 2 BASIC11.98□□□□□ -0.49
RAB4AP20338 LY6E-213ENST00000522528 606 ntTSL 3 BASIC11.98□□□□□ -0.49
RAB4AP20338 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC11.98□□□□□ -0.49
RAB4AP20338 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC11.98□□□□□ -0.49
RAB4AP20338 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
RAB4AP20338 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC11.98□□□□□ -0.49
RAB4AP20338 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC11.98□□□□□ -0.49
RAB4AP20338 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC11.98□□□□□ -0.49
RAB4AP20338 DFFB-212ENST00000625756 649 ntTSL 5 BASIC11.98□□□□□ -0.49
RAB4AP20338 PGM5P2-202ENST00000637225 1043 ntBASIC11.98□□□□□ -0.49
RAB4AP20338 NUMA1-205ENST00000393695 7343 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
RAB4AP20338 MLXIP-208ENST00000538698 5097 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
RAB4AP20338 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC11.98□□□□□ -0.49
RAB4AP20338 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC11.98□□□□□ -0.49
RAB4AP20338 RNF26-201ENST00000311413 2787 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
RAB4AP20338 FAM214B-204ENST00000378566 2566 ntTSL 2 BASIC11.98□□□□□ -0.49
RAB4AP20338 HES2-201ENST00000377834 4262 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
RAB4AP20338 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC11.98□□□□□ -0.49
RAB4AP20338 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 184.4 ms