Protein–RNA interactions for Protein: P13765

HLA-DOB, HLA class II histocompatibility antigen, DO beta chain, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOBP13765 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC13.94□□□□□ -0.18
HLA-DOBP13765 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
HLA-DOBP13765 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
HLA-DOBP13765 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
HLA-DOBP13765 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC13.93□□□□□ -0.18
HLA-DOBP13765 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
HLA-DOBP13765 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
HLA-DOBP13765 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
HLA-DOBP13765 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
HLA-DOBP13765 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
HLA-DOBP13765 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
HLA-DOBP13765 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC13.93□□□□□ -0.18
HLA-DOBP13765 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
HLA-DOBP13765 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
HLA-DOBP13765 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
HLA-DOBP13765 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
HLA-DOBP13765 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC13.93□□□□□ -0.18
HLA-DOBP13765 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC13.93□□□□□ -0.18
HLA-DOBP13765 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
HLA-DOBP13765 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC13.93□□□□□ -0.18
HLA-DOBP13765 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC13.93□□□□□ -0.18
HLA-DOBP13765 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC13.93□□□□□ -0.18
HLA-DOBP13765 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC13.93□□□□□ -0.18
HLA-DOBP13765 CYMP-203ENST00000474680 1263 ntBASIC13.93□□□□□ -0.18
HLA-DOBP13765 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
HLA-DOBP13765 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC13.93□□□□□ -0.18
HLA-DOBP13765 UBL5-208ENST00000593087 320 ntTSL 3 BASIC13.93□□□□□ -0.18
HLA-DOBP13765 5S_rRNA.22-201ENST00000614916 106 ntBASIC13.93□□□□□ -0.18
HLA-DOBP13765 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC13.93□□□□□ -0.18
HLA-DOBP13765 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC13.93□□□□□ -0.18
HLA-DOBP13765 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
HLA-DOBP13765 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
HLA-DOBP13765 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
HLA-DOBP13765 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
HLA-DOBP13765 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
HLA-DOBP13765 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
HLA-DOBP13765 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
HLA-DOBP13765 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
HLA-DOBP13765 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
HLA-DOBP13765 GSN-215ENST00000545652 2428 ntTSL 2 BASIC13.93□□□□□ -0.18
HLA-DOBP13765 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
HLA-DOBP13765 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
HLA-DOBP13765 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
HLA-DOBP13765 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
HLA-DOBP13765 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
HLA-DOBP13765 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
HLA-DOBP13765 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC13.93□□□□□ -0.18
HLA-DOBP13765 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
HLA-DOBP13765 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
HLA-DOBP13765 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC13.92□□□□□ -0.18
HLA-DOBP13765 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
HLA-DOBP13765 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
HLA-DOBP13765 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC13.92□□□□□ -0.18
HLA-DOBP13765 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC13.92□□□□□ -0.18
HLA-DOBP13765 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC13.92□□□□□ -0.18
HLA-DOBP13765 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
HLA-DOBP13765 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
HLA-DOBP13765 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
HLA-DOBP13765 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
HLA-DOBP13765 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
HLA-DOBP13765 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
HLA-DOBP13765 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
HLA-DOBP13765 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
HLA-DOBP13765 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC13.92□□□□□ -0.18
HLA-DOBP13765 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC13.92□□□□□ -0.18
HLA-DOBP13765 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
HLA-DOBP13765 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
HLA-DOBP13765 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
HLA-DOBP13765 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
HLA-DOBP13765 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
HLA-DOBP13765 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC13.92□□□□□ -0.18
HLA-DOBP13765 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
HLA-DOBP13765 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC13.92□□□□□ -0.18
HLA-DOBP13765 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC13.92□□□□□ -0.18
HLA-DOBP13765 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC13.92□□□□□ -0.18
HLA-DOBP13765 AL512638.1-201ENST00000457493 794 ntBASIC13.92□□□□□ -0.18
HLA-DOBP13765 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
HLA-DOBP13765 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
HLA-DOBP13765 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC13.92□□□□□ -0.18
HLA-DOBP13765 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC13.92□□□□□ -0.18
HLA-DOBP13765 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC13.92□□□□□ -0.18
HLA-DOBP13765 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC13.92□□□□□ -0.18
HLA-DOBP13765 AC135586.1-201ENST00000539323 574 ntBASIC13.92□□□□□ -0.18
HLA-DOBP13765 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC13.92□□□□□ -0.18
HLA-DOBP13765 TIMM17BP1-201ENST00000545713 516 ntBASIC13.92□□□□□ -0.18
HLA-DOBP13765 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC13.92□□□□□ -0.18
HLA-DOBP13765 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
HLA-DOBP13765 PRR29-204ENST00000577953 565 ntTSL 4 BASIC13.92□□□□□ -0.18
HLA-DOBP13765 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
HLA-DOBP13765 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
HLA-DOBP13765 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC13.92□□□□□ -0.18
HLA-DOBP13765 AC004790.1-201ENST00000612686 536 ntBASIC13.92□□□□□ -0.18
HLA-DOBP13765 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
HLA-DOBP13765 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
HLA-DOBP13765 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC13.92□□□□□ -0.18
HLA-DOBP13765 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
HLA-DOBP13765 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
HLA-DOBP13765 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC13.92□□□□□ -0.18
HLA-DOBP13765 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
HLA-DOBP13765 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC13.92□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 96.3 ms