Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC16.23■□□□□ 0.19
RB1P06400 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
RB1P06400 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
RB1P06400 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
RB1P06400 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
RB1P06400 AC099398.1-201ENST00000567919 2776 ntBASIC16.23■□□□□ 0.19
RB1P06400 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RB1P06400 FLJ38576-201ENST00000623820 2459 ntBASIC16.23■□□□□ 0.19
RB1P06400 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RB1P06400 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
RB1P06400 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
RB1P06400 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC16.23■□□□□ 0.19
RB1P06400 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RB1P06400 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
RB1P06400 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
RB1P06400 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RB1P06400 CABP1-203ENST00000351200 770 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RB1P06400 PSMB5-202ENST00000361611 1294 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RB1P06400 CD1E-202ENST00000368155 696 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
RB1P06400 CD1E-204ENST00000368157 399 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
RB1P06400 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RB1P06400 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RB1P06400 TMEM177-203ENST00000409951 1216 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
RB1P06400 PSMB5-203ENST00000425762 900 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
RB1P06400 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
RB1P06400 AC012618.1-201ENST00000461223 412 ntBASIC16.23■□□□□ 0.19
RB1P06400 CLDN11-207ENST00000486975 1139 ntTSL 2 BASIC16.23■□□□□ 0.19
RB1P06400 AC124301.1-201ENST00000524885 602 ntTSL 3 BASIC16.23■□□□□ 0.19
RB1P06400 CSH2-206ENST00000560142 749 ntTSL 5 BASIC16.23■□□□□ 0.19
RB1P06400 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC16.23■□□□□ 0.19
RB1P06400 FAAP24-204ENST00000590179 784 ntTSL 2 BASIC16.23■□□□□ 0.19
RB1P06400 AL136295.7-201ENST00000619226 1200 ntBASIC16.23■□□□□ 0.19
RB1P06400 AC092171.3-201ENST00000610122 2651 ntBASIC16.23■□□□□ 0.19
RB1P06400 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
RB1P06400 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC16.23■□□□□ 0.19
RB1P06400 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
RB1P06400 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC16.23■□□□□ 0.19
RB1P06400 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC16.23■□□□□ 0.19
RB1P06400 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RB1P06400 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC16.23■□□□□ 0.19
RB1P06400 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC16.22■□□□□ 0.19
RB1P06400 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC16.22■□□□□ 0.19
RB1P06400 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RB1P06400 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
RB1P06400 AC092978.1-201ENST00000474979 1309 ntTSL 5 BASIC16.22■□□□□ 0.19
RB1P06400 AC092978.1-202ENST00000637590 1327 ntBASIC16.22■□□□□ 0.19
RB1P06400 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
RB1P06400 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC16.22■□□□□ 0.19
RB1P06400 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
RB1P06400 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
RB1P06400 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
RB1P06400 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
RB1P06400 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
RB1P06400 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
RB1P06400 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RB1P06400 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RB1P06400 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RB1P06400 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
RB1P06400 NPPA-201ENST00000376476 728 ntTSL 3 BASIC16.22■□□□□ 0.19
RB1P06400 FAM3B-203ENST00000398647 864 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
RB1P06400 FAM3B-204ENST00000398652 1125 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
RB1P06400 PEX13-203ENST00000414712 1014 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
RB1P06400 RPL17P11-201ENST00000417593 544 ntBASIC16.22■□□□□ 0.19
RB1P06400 AC025165.3-201ENST00000471530 679 ntTSL 5 BASIC16.22■□□□□ 0.19
RB1P06400 AC008267.1-201ENST00000474858 1069 ntBASIC16.22■□□□□ 0.19
RB1P06400 AC018680.1-202ENST00000500324 525 ntTSL 3 BASIC16.22■□□□□ 0.19
RB1P06400 MARK2P5-201ENST00000507649 634 ntBASIC16.22■□□□□ 0.19
RB1P06400 BHMT-206ENST00000524080 1207 ntTSL 2 BASIC16.22■□□□□ 0.19
RB1P06400 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC16.22■□□□□ 0.19
RB1P06400 AL135838.1-202ENST00000556411 441 ntTSL 2 BASIC16.22■□□□□ 0.19
RB1P06400 CMTM3-215ENST00000568477 687 ntTSL 3 BASIC16.22■□□□□ 0.19
RB1P06400 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
RB1P06400 CENPX-208ENST00000584347 799 ntTSL 2 BASIC16.22■□□□□ 0.19
RB1P06400 AL133499.1-201ENST00000596207 608 ntBASIC16.22■□□□□ 0.19
RB1P06400 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC16.22■□□□□ 0.19
RB1P06400 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
RB1P06400 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC16.22■□□□□ 0.19
RB1P06400 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
RB1P06400 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
RB1P06400 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC16.22■□□□□ 0.19
RB1P06400 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RB1P06400 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
RB1P06400 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
RB1P06400 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC16.22■□□□□ 0.19
RB1P06400 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC16.22■□□□□ 0.19
RB1P06400 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RB1P06400 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RB1P06400 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
RB1P06400 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
RB1P06400 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC16.21■□□□□ 0.19
RB1P06400 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
RB1P06400 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC16.21■□□□□ 0.19
RB1P06400 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
RB1P06400 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
RB1P06400 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC16.21■□□□□ 0.19
RB1P06400 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
RB1P06400 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
RB1P06400 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
RB1P06400 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
RB1P06400 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC16.21■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms