Protein–RNA interactions for Protein: P05067

APP, Amyloid-beta A4 protein, humanhuman

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APPP05067 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
APPP05067 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC18.63■□□□□ 0.57
APPP05067 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
APPP05067 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
APPP05067 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
APPP05067 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC18.63■□□□□ 0.57
APPP05067 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
APPP05067 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
APPP05067 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
APPP05067 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
APPP05067 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
APPP05067 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
APPP05067 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
APPP05067 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC18.63■□□□□ 0.57
APPP05067 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
APPP05067 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
APPP05067 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
APPP05067 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC18.62■□□□□ 0.57
APPP05067 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
APPP05067 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
APPP05067 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
APPP05067 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
APPP05067 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
APPP05067 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
APPP05067 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC18.62■□□□□ 0.57
APPP05067 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
APPP05067 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
APPP05067 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
APPP05067 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
APPP05067 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
APPP05067 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
APPP05067 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
APPP05067 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
APPP05067 COPE-202ENST00000349893 948 ntTSL 2 BASIC18.62■□□□□ 0.57
APPP05067 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
APPP05067 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
APPP05067 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC18.62■□□□□ 0.57
APPP05067 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
APPP05067 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC18.62■□□□□ 0.57
APPP05067 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC18.62■□□□□ 0.57
APPP05067 VDAC1P7-201ENST00000462417 847 ntBASIC18.62■□□□□ 0.57
APPP05067 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC18.62■□□□□ 0.57
APPP05067 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC18.62■□□□□ 0.57
APPP05067 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
APPP05067 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC18.62■□□□□ 0.57
APPP05067 AC005225.4-201ENST00000557330 545 ntBASIC18.62■□□□□ 0.57
APPP05067 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC18.62■□□□□ 0.57
APPP05067 WFDC1-204ENST00000613603 549 ntBASIC18.62■□□□□ 0.57
APPP05067 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC18.62■□□□□ 0.57
APPP05067 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC18.62■□□□□ 0.57
APPP05067 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
APPP05067 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
APPP05067 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC18.62■□□□□ 0.57
APPP05067 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC18.62■□□□□ 0.57
APPP05067 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
APPP05067 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC18.62■□□□□ 0.57
APPP05067 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC18.62■□□□□ 0.57
APPP05067 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
APPP05067 POLL-217ENST00000628479 1953 ntTSL 5 BASIC18.62■□□□□ 0.57
APPP05067 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
APPP05067 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
APPP05067 MFF-204ENST00000353339 2186 ntTSL 5 BASIC18.62■□□□□ 0.57
APPP05067 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
APPP05067 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC18.62■□□□□ 0.57
APPP05067 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC18.62■□□□□ 0.57
APPP05067 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC18.62■□□□□ 0.57
APPP05067 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC18.62■□□□□ 0.57
APPP05067 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
APPP05067 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
APPP05067 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
APPP05067 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
APPP05067 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
APPP05067 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC18.61■□□□□ 0.57
APPP05067 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
APPP05067 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
APPP05067 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
APPP05067 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
APPP05067 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
APPP05067 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
APPP05067 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC18.61■□□□□ 0.57
APPP05067 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC18.61■□□□□ 0.57
APPP05067 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC18.61■□□□□ 0.57
APPP05067 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
APPP05067 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
APPP05067 THSD4-202ENST00000355327 9200 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
APPP05067 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC18.61■□□□□ 0.57
APPP05067 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
APPP05067 AMT-224ENST00000635808 1610 ntTSL 5 BASIC18.61■□□□□ 0.57
APPP05067 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC18.61■□□□□ 0.57
APPP05067 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
APPP05067 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
APPP05067 AC098614.1-201ENST00000368528 745 ntBASIC18.61■□□□□ 0.57
APPP05067 AC134915.1-201ENST00000426461 574 ntBASIC18.61■□□□□ 0.57
APPP05067 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC18.61■□□□□ 0.57
APPP05067 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC18.61■□□□□ 0.57
APPP05067 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC18.61■□□□□ 0.57
APPP05067 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC18.61■□□□□ 0.57
APPP05067 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
APPP05067 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC18.61■□□□□ 0.57
APPP05067 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC18.61■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 62 ms