Protein–RNA interactions for Protein: P04626

ERBB2, Receptor tyrosine-protein kinase erbB-2, humanhuman

Predictions only

Length 1,255 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2P04626 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
ERBB2P04626 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC16.26■□□□□ 0.19
ERBB2P04626 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
ERBB2P04626 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
ERBB2P04626 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC16.26■□□□□ 0.19
ERBB2P04626 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
ERBB2P04626 LINC00528-201ENST00000600723 2160 ntBASIC16.26■□□□□ 0.19
ERBB2P04626 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ERBB2P04626 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
ERBB2P04626 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
ERBB2P04626 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC16.26■□□□□ 0.19
ERBB2P04626 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
ERBB2P04626 METTL26-204ENST00000397665 558 ntTSL 2 BASIC16.26■□□□□ 0.19
ERBB2P04626 AC104457.1-201ENST00000401024 814 ntBASIC16.26■□□□□ 0.19
ERBB2P04626 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC16.26■□□□□ 0.19
ERBB2P04626 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC16.26■□□□□ 0.19
ERBB2P04626 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC16.26■□□□□ 0.19
ERBB2P04626 AC123567.1-201ENST00000548294 1261 ntBASIC16.26■□□□□ 0.19
ERBB2P04626 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC16.26■□□□□ 0.19
ERBB2P04626 AP000845.1-201ENST00000581677 2131 ntBASIC16.26■□□□□ 0.19
ERBB2P04626 AC107373.2-201ENST00000607735 490 ntBASIC16.26■□□□□ 0.19
ERBB2P04626 AC093726.1-201ENST00000608064 963 ntBASIC16.26■□□□□ 0.19
ERBB2P04626 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC16.26■□□□□ 0.19
ERBB2P04626 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC16.26■□□□□ 0.19
ERBB2P04626 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ERBB2P04626 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ERBB2P04626 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ERBB2P04626 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ERBB2P04626 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC16.26■□□□□ 0.19
ERBB2P04626 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ERBB2P04626 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC16.26■□□□□ 0.19
ERBB2P04626 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
ERBB2P04626 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC16.26■□□□□ 0.19
ERBB2P04626 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC16.26■□□□□ 0.19
ERBB2P04626 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ERBB2P04626 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ERBB2P04626 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
ERBB2P04626 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC16.26■□□□□ 0.19
ERBB2P04626 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC16.26■□□□□ 0.19
ERBB2P04626 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ERBB2P04626 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ERBB2P04626 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC16.26■□□□□ 0.19
ERBB2P04626 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
ERBB2P04626 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
ERBB2P04626 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
ERBB2P04626 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC16.25■□□□□ 0.19
ERBB2P04626 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
ERBB2P04626 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
ERBB2P04626 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
ERBB2P04626 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
ERBB2P04626 REXO1L4P-201ENST00000605109 1937 ntBASIC16.25■□□□□ 0.19
ERBB2P04626 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
ERBB2P04626 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
ERBB2P04626 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC16.25■□□□□ 0.19
ERBB2P04626 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC16.25■□□□□ 0.19
ERBB2P04626 AMT-232ENST00000636199 1546 ntTSL 5 BASIC16.25■□□□□ 0.19
ERBB2P04626 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
ERBB2P04626 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
ERBB2P04626 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
ERBB2P04626 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
ERBB2P04626 AC006058.4-201ENST00000624016 1670 ntBASIC16.25■□□□□ 0.19
ERBB2P04626 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
ERBB2P04626 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
ERBB2P04626 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC16.25■□□□□ 0.19
ERBB2P04626 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
ERBB2P04626 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC16.25■□□□□ 0.19
ERBB2P04626 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
ERBB2P04626 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
ERBB2P04626 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC16.25■□□□□ 0.19
ERBB2P04626 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC16.25■□□□□ 0.19
ERBB2P04626 AC026410.3-201ENST00000514280 936 ntBASIC16.25■□□□□ 0.19
ERBB2P04626 CDK4-206ENST00000549606 558 ntTSL 2 BASIC16.25■□□□□ 0.19
ERBB2P04626 AC190387.1-201ENST00000551683 408 ntBASIC16.25■□□□□ 0.19
ERBB2P04626 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC16.25■□□□□ 0.19
ERBB2P04626 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
ERBB2P04626 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC16.25■□□□□ 0.19
ERBB2P04626 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC16.25■□□□□ 0.19
ERBB2P04626 AC007431.3-201ENST00000623221 587 ntBASIC16.25■□□□□ 0.19
ERBB2P04626 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC16.25■□□□□ 0.19
ERBB2P04626 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
ERBB2P04626 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
ERBB2P04626 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC16.25■□□□□ 0.19
ERBB2P04626 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
ERBB2P04626 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
ERBB2P04626 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
ERBB2P04626 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC16.25■□□□□ 0.19
ERBB2P04626 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
ERBB2P04626 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
ERBB2P04626 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
ERBB2P04626 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
ERBB2P04626 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
ERBB2P04626 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
ERBB2P04626 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC16.25■□□□□ 0.19
ERBB2P04626 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
ERBB2P04626 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
ERBB2P04626 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
ERBB2P04626 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
ERBB2P04626 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
ERBB2P04626 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC16.24■□□□□ 0.19
ERBB2P04626 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC16.24■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms