Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
VTNP04004 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
VTNP04004 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
VTNP04004 MIR1202-201ENST00000408529 83 ntBASIC16.89■□□□□ 0.29
VTNP04004 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC16.89■□□□□ 0.29
VTNP04004 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC16.89■□□□□ 0.29
VTNP04004 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
VTNP04004 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC16.89■□□□□ 0.29
VTNP04004 RNA5SP486-201ENST00000515961 83 ntBASIC16.89■□□□□ 0.29
VTNP04004 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC16.89■□□□□ 0.29
VTNP04004 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC16.89■□□□□ 0.29
VTNP04004 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC16.89■□□□□ 0.29
VTNP04004 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC16.89■□□□□ 0.29
VTNP04004 SAMD11P1-201ENST00000571429 661 ntBASIC16.89■□□□□ 0.29
VTNP04004 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC16.89■□□□□ 0.29
VTNP04004 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC16.89■□□□□ 0.29
VTNP04004 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC16.89■□□□□ 0.29
VTNP04004 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
VTNP04004 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
VTNP04004 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC16.89■□□□□ 0.29
VTNP04004 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
VTNP04004 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
VTNP04004 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
VTNP04004 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
VTNP04004 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC16.89■□□□□ 0.29
VTNP04004 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC16.89■□□□□ 0.29
VTNP04004 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC16.89■□□□□ 0.29
VTNP04004 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
VTNP04004 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC16.89■□□□□ 0.29
VTNP04004 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC16.88■□□□□ 0.29
VTNP04004 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC16.88■□□□□ 0.29
VTNP04004 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC16.88■□□□□ 0.29
VTNP04004 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
VTNP04004 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC16.88■□□□□ 0.29
VTNP04004 DKFZP434H168-201ENST00000567381 1905 ntBASIC16.88■□□□□ 0.29
VTNP04004 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
VTNP04004 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC16.88■□□□□ 0.29
VTNP04004 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
VTNP04004 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
VTNP04004 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC16.88■□□□□ 0.29
VTNP04004 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
VTNP04004 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
VTNP04004 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
VTNP04004 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
VTNP04004 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
VTNP04004 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC16.88■□□□□ 0.29
VTNP04004 MPV17-205ENST00000402310 906 ntTSL 5 BASIC16.88■□□□□ 0.29
VTNP04004 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC16.88■□□□□ 0.29
VTNP04004 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC16.88■□□□□ 0.29
VTNP04004 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC16.88■□□□□ 0.29
VTNP04004 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
VTNP04004 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC16.88■□□□□ 0.29
VTNP04004 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC16.88■□□□□ 0.29
VTNP04004 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
VTNP04004 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
VTNP04004 RIT1-205ENST00000539040 919 ntTSL 2 BASIC16.88■□□□□ 0.29
VTNP04004 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
VTNP04004 AC023310.1-201ENST00000554836 735 ntBASIC16.88■□□□□ 0.29
VTNP04004 HNRNPA1P48-202ENST00000565308 961 ntBASIC16.88■□□□□ 0.29
VTNP04004 DUX4L45-201ENST00000566406 1057 ntBASIC16.88■□□□□ 0.29
VTNP04004 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC16.88■□□□□ 0.29
VTNP04004 RN7SL560P-201ENST00000577943 264 ntBASIC16.88■□□□□ 0.29
VTNP04004 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC16.88■□□□□ 0.29
VTNP04004 GPR182-203ENST00000622922 591 ntBASIC16.88■□□□□ 0.29
VTNP04004 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
VTNP04004 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC16.88■□□□□ 0.29
VTNP04004 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
VTNP04004 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
VTNP04004 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
VTNP04004 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
VTNP04004 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
VTNP04004 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
VTNP04004 AC090616.6-203ENST00000579186 1945 ntBASIC16.88■□□□□ 0.29
VTNP04004 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC16.88■□□□□ 0.29
VTNP04004 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
VTNP04004 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
VTNP04004 CICP11-201ENST00000434745 2827 ntBASIC16.88■□□□□ 0.29
VTNP04004 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
VTNP04004 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
VTNP04004 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
VTNP04004 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC16.87■□□□□ 0.29
VTNP04004 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC16.87■□□□□ 0.29
VTNP04004 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
VTNP04004 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC16.87■□□□□ 0.29
VTNP04004 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
VTNP04004 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
VTNP04004 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC16.87■□□□□ 0.29
VTNP04004 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
VTNP04004 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC16.87■□□□□ 0.29
VTNP04004 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
VTNP04004 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
VTNP04004 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC16.87■□□□□ 0.29
VTNP04004 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC16.87■□□□□ 0.29
VTNP04004 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
VTNP04004 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
VTNP04004 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC16.87■□□□□ 0.29
VTNP04004 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
VTNP04004 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
VTNP04004 RPS15-201ENST00000233609 534 ntTSL 2 BASIC16.87■□□□□ 0.29
VTNP04004 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms