Protein–RNA interactions for Protein: O75678

RFPL2, Ret finger protein-like 2, humanhuman

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFPL2O75678 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC16.15■□□□□ 0.18
RFPL2O75678 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC16.15■□□□□ 0.18
RFPL2O75678 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
RFPL2O75678 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RFPL2O75678 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
RFPL2O75678 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RFPL2O75678 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
RFPL2O75678 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC16.15■□□□□ 0.18
RFPL2O75678 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
RFPL2O75678 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RFPL2O75678 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC16.15■□□□□ 0.18
RFPL2O75678 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
RFPL2O75678 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.18
RFPL2O75678 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC16.14■□□□□ 0.18
RFPL2O75678 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
RFPL2O75678 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC16.14■□□□□ 0.17
RFPL2O75678 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
RFPL2O75678 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC16.14■□□□□ 0.17
RFPL2O75678 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
RFPL2O75678 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RFPL2O75678 LINC02199-201ENST00000506655 2702 ntBASIC16.14■□□□□ 0.17
RFPL2O75678 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
RFPL2O75678 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC16.14■□□□□ 0.17
RFPL2O75678 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
RFPL2O75678 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RFPL2O75678 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
RFPL2O75678 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RFPL2O75678 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC16.14■□□□□ 0.17
RFPL2O75678 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC16.14■□□□□ 0.17
RFPL2O75678 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC16.14■□□□□ 0.17
RFPL2O75678 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC16.14■□□□□ 0.17
RFPL2O75678 PFN2-205ENST00000461868 613 ntTSL 2 BASIC16.14■□□□□ 0.17
RFPL2O75678 AC091804.1-201ENST00000486888 567 ntBASIC16.14■□□□□ 0.17
RFPL2O75678 HIST2H2BC-201ENST00000498492 580 ntBASIC16.14■□□□□ 0.17
RFPL2O75678 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
RFPL2O75678 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC16.14■□□□□ 0.17
RFPL2O75678 SCARNA20.5-201ENST00000516991 142 ntBASIC16.14■□□□□ 0.17
RFPL2O75678 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC16.14■□□□□ 0.17
RFPL2O75678 ZSCAN32-210ENST00000573830 668 ntTSL 3 BASIC16.14■□□□□ 0.17
RFPL2O75678 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC16.14■□□□□ 0.17
RFPL2O75678 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
RFPL2O75678 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC16.14■□□□□ 0.17
RFPL2O75678 ZNFX1-AS1_1.1-201ENST00000615787 198 ntBASIC16.14■□□□□ 0.17
RFPL2O75678 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC16.14■□□□□ 0.17
RFPL2O75678 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC16.14■□□□□ 0.17
RFPL2O75678 PRSS30P-206ENST00000641773 873 ntBASIC16.14■□□□□ 0.17
RFPL2O75678 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
RFPL2O75678 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC16.14■□□□□ 0.17
RFPL2O75678 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
RFPL2O75678 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
RFPL2O75678 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
RFPL2O75678 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
RFPL2O75678 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RFPL2O75678 OSTF1-201ENST00000346234 1319 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RFPL2O75678 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC16.14■□□□□ 0.17
RFPL2O75678 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
RFPL2O75678 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
RFPL2O75678 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RFPL2O75678 AL023775.1-201ENST00000454907 1746 ntBASIC16.14■□□□□ 0.17
RFPL2O75678 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RFPL2O75678 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RFPL2O75678 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
RFPL2O75678 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
RFPL2O75678 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC16.13■□□□□ 0.17
RFPL2O75678 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RFPL2O75678 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RFPL2O75678 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
RFPL2O75678 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
RFPL2O75678 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RFPL2O75678 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RFPL2O75678 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RFPL2O75678 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC16.13■□□□□ 0.17
RFPL2O75678 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RFPL2O75678 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
RFPL2O75678 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC16.13■□□□□ 0.17
RFPL2O75678 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RFPL2O75678 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
RFPL2O75678 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC16.13■□□□□ 0.17
RFPL2O75678 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
RFPL2O75678 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
RFPL2O75678 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RFPL2O75678 MIR663B-201ENST00000408361 115 ntBASIC16.13■□□□□ 0.17
RFPL2O75678 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC16.13■□□□□ 0.17
RFPL2O75678 NUS1P3-201ENST00000423502 862 ntBASIC16.13■□□□□ 0.17
RFPL2O75678 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC16.13■□□□□ 0.17
RFPL2O75678 AL139420.1-201ENST00000439394 653 ntTSL 3 BASIC16.13■□□□□ 0.17
RFPL2O75678 BX284668.4-201ENST00000453917 508 ntBASIC16.13■□□□□ 0.17
RFPL2O75678 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
RFPL2O75678 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC16.13■□□□□ 0.17
RFPL2O75678 AC020914.3-201ENST00000594712 304 ntBASIC16.13■□□□□ 0.17
RFPL2O75678 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC16.13■□□□□ 0.17
RFPL2O75678 AC138028.6-201ENST00000616106 1482 ntBASIC16.13■□□□□ 0.17
RFPL2O75678 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RFPL2O75678 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
RFPL2O75678 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RFPL2O75678 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RFPL2O75678 FER1L4-210ENST00000615531 5998 ntBASIC16.13■□□□□ 0.17
RFPL2O75678 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
RFPL2O75678 MTHFR-217ENST00000641820 1569 ntBASIC16.13■□□□□ 0.17
RFPL2O75678 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 44.1 ms