Protein–RNA interactions for Protein: O75473

LGR5, Leucine-rich repeat-containing G-protein coupled receptor 5, humanhuman

Predictions only

Length 907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LGR5O75473 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC17.14■□□□□ 0.33
LGR5O75473 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC17.14■□□□□ 0.33
LGR5O75473 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC17.14■□□□□ 0.33
LGR5O75473 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
LGR5O75473 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
LGR5O75473 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC17.14■□□□□ 0.33
LGR5O75473 RIT1-205ENST00000539040 919 ntTSL 2 BASIC17.14■□□□□ 0.33
LGR5O75473 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC17.14■□□□□ 0.33
LGR5O75473 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC17.14■□□□□ 0.33
LGR5O75473 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC17.14■□□□□ 0.33
LGR5O75473 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC17.14■□□□□ 0.33
LGR5O75473 AC243960.2-201ENST00000600996 747 ntBASIC17.14■□□□□ 0.33
LGR5O75473 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC17.14■□□□□ 0.33
LGR5O75473 AC068587.10-201ENST00000641210 219 ntBASIC17.14■□□□□ 0.33
LGR5O75473 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
LGR5O75473 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC17.14■□□□□ 0.33
LGR5O75473 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
LGR5O75473 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
LGR5O75473 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
LGR5O75473 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
LGR5O75473 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
LGR5O75473 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
LGR5O75473 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
LGR5O75473 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC17.14■□□□□ 0.33
LGR5O75473 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC17.14■□□□□ 0.33
LGR5O75473 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
LGR5O75473 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
LGR5O75473 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC17.13■□□□□ 0.33
LGR5O75473 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
LGR5O75473 FOS-202ENST00000535987 1402 ntTSL 2 BASIC17.13■□□□□ 0.33
LGR5O75473 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
LGR5O75473 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
LGR5O75473 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
LGR5O75473 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
LGR5O75473 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
LGR5O75473 RPS15-201ENST00000233609 534 ntTSL 2 BASIC17.13■□□□□ 0.33
LGR5O75473 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
LGR5O75473 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
LGR5O75473 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
LGR5O75473 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC17.13■□□□□ 0.33
LGR5O75473 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
LGR5O75473 MIR1247-201ENST00000408206 136 ntBASIC17.13■□□□□ 0.33
LGR5O75473 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
LGR5O75473 AHRR-211ENST00000515206 462 ntTSL 5 BASIC17.13■□□□□ 0.33
LGR5O75473 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC17.13■□□□□ 0.33
LGR5O75473 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC17.13■□□□□ 0.33
LGR5O75473 MIR3615-201ENST00000581999 87 ntBASIC17.13■□□□□ 0.33
LGR5O75473 RPS15-205ENST00000586686 562 ntTSL 5 BASIC17.13■□□□□ 0.33
LGR5O75473 RPS15-208ENST00000591804 711 ntTSL 5 BASIC17.13■□□□□ 0.33
LGR5O75473 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
LGR5O75473 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC17.13■□□□□ 0.33
LGR5O75473 ETV2-208ENST00000621247 941 ntTSL 5 BASIC17.13■□□□□ 0.33
LGR5O75473 SFTA2-203ENST00000634371 815 ntTSL 5 BASIC17.13■□□□□ 0.33
LGR5O75473 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC17.13■□□□□ 0.33
LGR5O75473 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
LGR5O75473 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
LGR5O75473 AP003680.1-201ENST00000598970 3660 ntBASIC17.13■□□□□ 0.33
LGR5O75473 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
LGR5O75473 DKFZP434H168-201ENST00000567381 1905 ntBASIC17.13■□□□□ 0.33
LGR5O75473 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
LGR5O75473 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
LGR5O75473 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
LGR5O75473 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
LGR5O75473 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC17.13■□□□□ 0.33
LGR5O75473 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
LGR5O75473 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
LGR5O75473 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
LGR5O75473 KRT8P14-201ENST00000414254 1442 ntBASIC17.13■□□□□ 0.33
LGR5O75473 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LGR5O75473 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
LGR5O75473 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
LGR5O75473 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
LGR5O75473 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
LGR5O75473 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
LGR5O75473 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC17.12■□□□□ 0.33
LGR5O75473 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
LGR5O75473 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC17.12■□□□□ 0.33
LGR5O75473 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LGR5O75473 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LGR5O75473 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
LGR5O75473 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
LGR5O75473 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
LGR5O75473 LSM5-207ENST00000410044 687 ntTSL 3 BASIC17.12■□□□□ 0.33
LGR5O75473 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC17.12■□□□□ 0.33
LGR5O75473 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC17.12■□□□□ 0.33
LGR5O75473 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC17.12■□□□□ 0.33
LGR5O75473 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
LGR5O75473 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC17.12■□□□□ 0.33
LGR5O75473 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
LGR5O75473 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC17.12■□□□□ 0.33
LGR5O75473 ZNF767P-206ENST00000513792 565 ntBASIC17.12■□□□□ 0.33
LGR5O75473 RNA5SP486-201ENST00000515961 83 ntBASIC17.12■□□□□ 0.33
LGR5O75473 RN7SL48P-201ENST00000579283 293 ntBASIC17.12■□□□□ 0.33
LGR5O75473 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
LGR5O75473 AC091271.1-201ENST00000611877 1162 ntBASIC17.12■□□□□ 0.33
LGR5O75473 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
LGR5O75473 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC17.12■□□□□ 0.33
LGR5O75473 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
LGR5O75473 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LGR5O75473 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms