Protein–RNA interactions for Protein: O75382

TRIM3, Tripartite motif-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 744 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3O75382 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
TRIM3O75382 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
TRIM3O75382 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC14.55□□□□□ -0.08
TRIM3O75382 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC14.55□□□□□ -0.08
TRIM3O75382 AC026748.1-201ENST00000624349 3251 ntBASIC14.55□□□□□ -0.08
TRIM3O75382 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
TRIM3O75382 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
TRIM3O75382 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC14.55□□□□□ -0.08
TRIM3O75382 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRIM3O75382 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
TRIM3O75382 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRIM3O75382 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRIM3O75382 AKAP12-204ENST00000402676 8432 ntAPPRIS P4 TSL 5 BASIC14.55□□□□□ -0.08
TRIM3O75382 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC14.55□□□□□ -0.08
TRIM3O75382 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRIM3O75382 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
TRIM3O75382 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRIM3O75382 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC14.54□□□□□ -0.08
TRIM3O75382 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
TRIM3O75382 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
TRIM3O75382 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
TRIM3O75382 CICP4-201ENST00000447359 2812 ntBASIC14.54□□□□□ -0.08
TRIM3O75382 AC097376.2-205ENST00000610159 5334 ntBASIC14.54□□□□□ -0.08
TRIM3O75382 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRIM3O75382 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
TRIM3O75382 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRIM3O75382 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC14.54□□□□□ -0.08
TRIM3O75382 GOLGA6L11P-201ENST00000417252 1298 ntBASIC14.54□□□□□ -0.08
TRIM3O75382 RAD18-204ENST00000418463 563 ntTSL 4 BASIC14.54□□□□□ -0.08
TRIM3O75382 RAD18-205ENST00000421052 582 ntTSL 3 BASIC14.54□□□□□ -0.08
TRIM3O75382 RASL12-203ENST00000434605 982 ntTSL 2 BASIC14.54□□□□□ -0.08
TRIM3O75382 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC14.54□□□□□ -0.08
TRIM3O75382 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC14.54□□□□□ -0.08
TRIM3O75382 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
TRIM3O75382 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC14.54□□□□□ -0.08
TRIM3O75382 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRIM3O75382 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC14.54□□□□□ -0.08
TRIM3O75382 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
TRIM3O75382 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRIM3O75382 5S_rRNA.22-201ENST00000614916 106 ntBASIC14.54□□□□□ -0.08
TRIM3O75382 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC14.54□□□□□ -0.08
TRIM3O75382 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC14.54□□□□□ -0.08
TRIM3O75382 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
TRIM3O75382 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRIM3O75382 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
TRIM3O75382 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC14.54□□□□□ -0.08
TRIM3O75382 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC14.54□□□□□ -0.08
TRIM3O75382 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC14.54□□□□□ -0.08
TRIM3O75382 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC14.54□□□□□ -0.08
TRIM3O75382 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC14.54□□□□□ -0.08
TRIM3O75382 BANP-203ENST00000393207 2438 ntTSL 2 BASIC14.54□□□□□ -0.08
TRIM3O75382 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC14.54□□□□□ -0.08
TRIM3O75382 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC14.54□□□□□ -0.08
TRIM3O75382 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRIM3O75382 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRIM3O75382 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC14.54□□□□□ -0.08
TRIM3O75382 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
TRIM3O75382 RSBN1-204ENST00000612242 6592 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
TRIM3O75382 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRIM3O75382 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRIM3O75382 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRIM3O75382 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRIM3O75382 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
TRIM3O75382 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
TRIM3O75382 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC14.53□□□□□ -0.08
TRIM3O75382 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
TRIM3O75382 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC14.53□□□□□ -0.08
TRIM3O75382 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRIM3O75382 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC14.53□□□□□ -0.08
TRIM3O75382 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
TRIM3O75382 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRIM3O75382 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
TRIM3O75382 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRIM3O75382 AL035633.1-201ENST00000406139 838 ntBASIC14.53□□□□□ -0.08
TRIM3O75382 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC14.53□□□□□ -0.08
TRIM3O75382 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC14.53□□□□□ -0.08
TRIM3O75382 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC14.53□□□□□ -0.08
TRIM3O75382 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRIM3O75382 AC074044.1-201ENST00000609673 707 ntBASIC14.53□□□□□ -0.08
TRIM3O75382 AC004461.2-201ENST00000629517 803 ntBASIC14.53□□□□□ -0.08
TRIM3O75382 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
TRIM3O75382 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRIM3O75382 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
TRIM3O75382 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
TRIM3O75382 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
TRIM3O75382 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRIM3O75382 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC14.53□□□□□ -0.08
TRIM3O75382 AL359258.3-201ENST00000622910 2331 ntBASIC14.53□□□□□ -0.08
TRIM3O75382 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRIM3O75382 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRIM3O75382 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
TRIM3O75382 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
TRIM3O75382 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC14.52□□□□□ -0.08
TRIM3O75382 Z97205.2-201ENST00000564697 1639 ntBASIC14.52□□□□□ -0.08
TRIM3O75382 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
TRIM3O75382 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
TRIM3O75382 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.08
TRIM3O75382 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
TRIM3O75382 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.08
TRIM3O75382 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC14.52□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms