Protein–RNA interactions for Protein: O60840

CACNA1F, Voltage-dependent L-type calcium channel subunit alpha-1F, humanhuman

Predictions only

Length 1,977 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1FO60840 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CACNA1FO60840 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CACNA1FO60840 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
CACNA1FO60840 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC19.14■□□□□ 0.65
CACNA1FO60840 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC19.14■□□□□ 0.65
CACNA1FO60840 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC19.14■□□□□ 0.65
CACNA1FO60840 HNRNPA1P48-202ENST00000565308 961 ntBASIC19.14■□□□□ 0.65
CACNA1FO60840 RPS15-202ENST00000585665 467 ntTSL 3 BASIC19.14■□□□□ 0.65
CACNA1FO60840 AL008721.1-201ENST00000609964 604 ntBASIC19.14■□□□□ 0.65
CACNA1FO60840 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CACNA1FO60840 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CACNA1FO60840 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC19.14■□□□□ 0.65
CACNA1FO60840 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CACNA1FO60840 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CACNA1FO60840 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CACNA1FO60840 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
CACNA1FO60840 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
CACNA1FO60840 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CACNA1FO60840 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC19.14■□□□□ 0.65
CACNA1FO60840 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
CACNA1FO60840 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CACNA1FO60840 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CACNA1FO60840 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC19.14■□□□□ 0.65
CACNA1FO60840 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
CACNA1FO60840 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC19.14■□□□□ 0.65
CACNA1FO60840 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
CACNA1FO60840 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
CACNA1FO60840 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CACNA1FO60840 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC19.13■□□□□ 0.65
CACNA1FO60840 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CACNA1FO60840 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC19.13■□□□□ 0.65
CACNA1FO60840 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC19.13■□□□□ 0.65
CACNA1FO60840 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CACNA1FO60840 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC19.13■□□□□ 0.65
CACNA1FO60840 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC19.13■□□□□ 0.65
CACNA1FO60840 FKBP4P6-201ENST00000457486 1332 ntBASIC19.13■□□□□ 0.65
CACNA1FO60840 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CACNA1FO60840 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CACNA1FO60840 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CACNA1FO60840 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC19.13■□□□□ 0.65
CACNA1FO60840 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CACNA1FO60840 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CACNA1FO60840 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC19.13■□□□□ 0.65
CACNA1FO60840 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CACNA1FO60840 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC19.13■□□□□ 0.65
CACNA1FO60840 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC19.13■□□□□ 0.65
CACNA1FO60840 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
CACNA1FO60840 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CACNA1FO60840 MPV17-205ENST00000402310 906 ntTSL 5 BASIC19.13■□□□□ 0.65
CACNA1FO60840 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC19.13■□□□□ 0.65
CACNA1FO60840 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC19.13■□□□□ 0.65
CACNA1FO60840 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC19.13■□□□□ 0.65
CACNA1FO60840 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC19.13■□□□□ 0.65
CACNA1FO60840 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC19.13■□□□□ 0.65
CACNA1FO60840 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CACNA1FO60840 AC132192.2-201ENST00000596206 1147 ntBASIC19.13■□□□□ 0.65
CACNA1FO60840 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CACNA1FO60840 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CACNA1FO60840 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC19.13■□□□□ 0.65
CACNA1FO60840 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC19.13■□□□□ 0.65
CACNA1FO60840 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CACNA1FO60840 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC19.13■□□□□ 0.65
CACNA1FO60840 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CACNA1FO60840 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
CACNA1FO60840 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CACNA1FO60840 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CACNA1FO60840 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CACNA1FO60840 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC19.12■□□□□ 0.65
CACNA1FO60840 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CACNA1FO60840 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CACNA1FO60840 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC19.12■□□□□ 0.65
CACNA1FO60840 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
CACNA1FO60840 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC19.12■□□□□ 0.65
CACNA1FO60840 YBX1P6-201ENST00000442962 1002 ntBASIC19.12■□□□□ 0.65
CACNA1FO60840 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC19.12■□□□□ 0.65
CACNA1FO60840 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC19.12■□□□□ 0.65
CACNA1FO60840 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC19.12■□□□□ 0.65
CACNA1FO60840 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CACNA1FO60840 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC19.12■□□□□ 0.65
CACNA1FO60840 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
CACNA1FO60840 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
CACNA1FO60840 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC19.12■□□□□ 0.65
CACNA1FO60840 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC19.12■□□□□ 0.65
CACNA1FO60840 TCAF2P1-201ENST00000291129 2421 ntBASIC19.12■□□□□ 0.65
CACNA1FO60840 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC19.12■□□□□ 0.65
CACNA1FO60840 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
CACNA1FO60840 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CACNA1FO60840 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CACNA1FO60840 SNX21-203ENST00000372541 771 ntTSL 2 BASIC19.12■□□□□ 0.65
CACNA1FO60840 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC19.12■□□□□ 0.65
CACNA1FO60840 CD8B2-202ENST00000417670 633 ntBASIC19.12■□□□□ 0.65
CACNA1FO60840 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC19.12■□□□□ 0.65
CACNA1FO60840 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC19.12■□□□□ 0.65
CACNA1FO60840 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC19.12■□□□□ 0.65
CACNA1FO60840 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC19.12■□□□□ 0.65
CACNA1FO60840 DERL2-202ENST00000570848 657 ntTSL 5 BASIC19.12■□□□□ 0.65
CACNA1FO60840 AC010328.2-201ENST00000597698 1111 ntBASIC19.12■□□□□ 0.65
CACNA1FO60840 AC005695.3-201ENST00000614522 232 ntBASIC19.12■□□□□ 0.65
CACNA1FO60840 AP001002.3-201ENST00000623482 206 ntBASIC19.12■□□□□ 0.65
CACNA1FO60840 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC19.12■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 52.5 ms