Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
PDLIM1O00151 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
PDLIM1O00151 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC14.87□□□□□ -0.03
PDLIM1O00151 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC14.87□□□□□ -0.03
PDLIM1O00151 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC14.87□□□□□ -0.03
PDLIM1O00151 MLLT10-201ENST00000307729 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
PDLIM1O00151 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
PDLIM1O00151 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
PDLIM1O00151 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
PDLIM1O00151 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
PDLIM1O00151 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC14.87□□□□□ -0.03
PDLIM1O00151 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
PDLIM1O00151 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC14.87□□□□□ -0.03
PDLIM1O00151 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
PDLIM1O00151 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
PDLIM1O00151 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
PDLIM1O00151 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
PDLIM1O00151 AC023274.1-201ENST00000418278 595 ntBASIC14.87□□□□□ -0.03
PDLIM1O00151 AC093724.1-201ENST00000448659 1027 ntBASIC14.87□□□□□ -0.03
PDLIM1O00151 AC245100.5-201ENST00000452108 331 ntBASIC14.87□□□□□ -0.03
PDLIM1O00151 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC14.87□□□□□ -0.03
PDLIM1O00151 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC14.87□□□□□ -0.03
PDLIM1O00151 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC14.87□□□□□ -0.03
PDLIM1O00151 PDPK2P-202ENST00000562415 1191 ntBASIC14.87□□□□□ -0.03
PDLIM1O00151 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
PDLIM1O00151 AC002347.1-201ENST00000569543 541 ntBASIC14.87□□□□□ -0.03
PDLIM1O00151 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC14.87□□□□□ -0.03
PDLIM1O00151 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC14.87□□□□□ -0.03
PDLIM1O00151 AL513190.1-201ENST00000621254 727 ntBASIC14.87□□□□□ -0.03
PDLIM1O00151 AC007064.4-201ENST00000637740 555 ntBASIC14.87□□□□□ -0.03
PDLIM1O00151 AC244021.1-201ENST00000417218 3662 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
PDLIM1O00151 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
PDLIM1O00151 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC14.87□□□□□ -0.03
PDLIM1O00151 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
PDLIM1O00151 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
PDLIM1O00151 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
PDLIM1O00151 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
PDLIM1O00151 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
PDLIM1O00151 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC14.87□□□□□ -0.03
PDLIM1O00151 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
PDLIM1O00151 IL20RA-201ENST00000316649 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
PDLIM1O00151 BCAR1-209ENST00000546196 1340 ntBASIC14.87□□□□□ -0.03
PDLIM1O00151 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
PDLIM1O00151 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
PDLIM1O00151 ANO9-201ENST00000332826 2542 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
PDLIM1O00151 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
PDLIM1O00151 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
PDLIM1O00151 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC14.87□□□□□ -0.03
PDLIM1O00151 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
PDLIM1O00151 KRBA2-202ENST00000396267 2562 ntTSL 2 BASIC14.86□□□□□ -0.03
PDLIM1O00151 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
PDLIM1O00151 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
PDLIM1O00151 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
PDLIM1O00151 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
PDLIM1O00151 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC14.86□□□□□ -0.03
PDLIM1O00151 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC14.86□□□□□ -0.03
PDLIM1O00151 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
PDLIM1O00151 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
PDLIM1O00151 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
PDLIM1O00151 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
PDLIM1O00151 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
PDLIM1O00151 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
PDLIM1O00151 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC14.86□□□□□ -0.03
PDLIM1O00151 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
PDLIM1O00151 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
PDLIM1O00151 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
PDLIM1O00151 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC14.86□□□□□ -0.03
PDLIM1O00151 DDT-204ENST00000404092 805 ntTSL 3 BASIC14.86□□□□□ -0.03
PDLIM1O00151 MCCD1P2-201ENST00000423228 335 ntBASIC14.86□□□□□ -0.03
PDLIM1O00151 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC14.86□□□□□ -0.03
PDLIM1O00151 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC14.86□□□□□ -0.03
PDLIM1O00151 MTRF1LP2-201ENST00000506027 1122 ntBASIC14.86□□□□□ -0.03
PDLIM1O00151 RPL28-209ENST00000560055 670 ntTSL 3 BASIC14.86□□□□□ -0.03
PDLIM1O00151 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
PDLIM1O00151 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC14.86□□□□□ -0.03
PDLIM1O00151 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC14.86□□□□□ -0.03
PDLIM1O00151 AC023511.2-201ENST00000618803 211 ntBASIC14.86□□□□□ -0.03
PDLIM1O00151 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
PDLIM1O00151 RPL15-213ENST00000611050 2363 ntAPPRIS P1 TSL 4 BASIC14.86□□□□□ -0.03
PDLIM1O00151 FBXO34-201ENST00000313833 3464 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
PDLIM1O00151 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
PDLIM1O00151 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
PDLIM1O00151 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
PDLIM1O00151 GRIK4-208ENST00000638419 3593 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
PDLIM1O00151 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC14.86□□□□□ -0.03
PDLIM1O00151 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC14.86□□□□□ -0.03
PDLIM1O00151 TGIF2-201ENST00000373872 3406 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
PDLIM1O00151 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
PDLIM1O00151 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC14.86□□□□□ -0.03
PDLIM1O00151 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC14.86□□□□□ -0.03
PDLIM1O00151 CD22-209ENST00000594250 2107 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
PDLIM1O00151 ZNF362-201ENST00000373428 2936 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
PDLIM1O00151 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC14.85□□□□□ -0.03
PDLIM1O00151 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
PDLIM1O00151 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
PDLIM1O00151 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
PDLIM1O00151 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC14.85□□□□□ -0.03
PDLIM1O00151 SLC1A7-202ENST00000371494 2637 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
PDLIM1O00151 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
PDLIM1O00151 AC127383.1-201ENST00000444697 1800 ntBASIC14.85□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 84.6 ms