Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
NPIPA3F8WFD2 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC14.15□□□□□ -0.14
NPIPA3F8WFD2 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
NPIPA3F8WFD2 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC14.15□□□□□ -0.14
NPIPA3F8WFD2 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
NPIPA3F8WFD2 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
NPIPA3F8WFD2 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
NPIPA3F8WFD2 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
NPIPA3F8WFD2 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
NPIPA3F8WFD2 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
NPIPA3F8WFD2 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
NPIPA3F8WFD2 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
NPIPA3F8WFD2 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
NPIPA3F8WFD2 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC14.15□□□□□ -0.14
NPIPA3F8WFD2 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
NPIPA3F8WFD2 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC14.15□□□□□ -0.14
NPIPA3F8WFD2 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
NPIPA3F8WFD2 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
NPIPA3F8WFD2 AC136604.1-201ENST00000418535 575 ntBASIC14.15□□□□□ -0.14
NPIPA3F8WFD2 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC14.15□□□□□ -0.14
NPIPA3F8WFD2 AC134915.1-201ENST00000426461 574 ntBASIC14.15□□□□□ -0.14
NPIPA3F8WFD2 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
NPIPA3F8WFD2 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC14.15□□□□□ -0.14
NPIPA3F8WFD2 AC022210.1-201ENST00000449856 793 ntBASIC14.15□□□□□ -0.14
NPIPA3F8WFD2 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC14.15□□□□□ -0.14
NPIPA3F8WFD2 NAA38-206ENST00000576384 424 ntTSL 2 BASIC14.15□□□□□ -0.14
NPIPA3F8WFD2 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC14.15□□□□□ -0.14
NPIPA3F8WFD2 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC14.15□□□□□ -0.14
NPIPA3F8WFD2 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
NPIPA3F8WFD2 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
NPIPA3F8WFD2 ABBA01031660.1-201ENST00000635219 756 ntBASIC14.15□□□□□ -0.14
NPIPA3F8WFD2 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
NPIPA3F8WFD2 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC14.15□□□□□ -0.14
NPIPA3F8WFD2 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
NPIPA3F8WFD2 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
NPIPA3F8WFD2 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
NPIPA3F8WFD2 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
NPIPA3F8WFD2 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
NPIPA3F8WFD2 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
NPIPA3F8WFD2 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC14.15□□□□□ -0.14
NPIPA3F8WFD2 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
NPIPA3F8WFD2 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC14.15□□□□□ -0.14
NPIPA3F8WFD2 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC14.15□□□□□ -0.14
NPIPA3F8WFD2 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
NPIPA3F8WFD2 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC14.15□□□□□ -0.14
NPIPA3F8WFD2 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
NPIPA3F8WFD2 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
NPIPA3F8WFD2 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
NPIPA3F8WFD2 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC14.14□□□□□ -0.15
NPIPA3F8WFD2 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
NPIPA3F8WFD2 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
NPIPA3F8WFD2 UBR2-201ENST00000372899 7857 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
NPIPA3F8WFD2 UBR2-202ENST00000372901 7857 ntAPPRIS ALT1 TSL 5 BASIC14.14□□□□□ -0.15
NPIPA3F8WFD2 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
NPIPA3F8WFD2 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC14.14□□□□□ -0.15
NPIPA3F8WFD2 SPRED1-201ENST00000299084 7780 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
NPIPA3F8WFD2 AC132872.4-202ENST00000622924 2756 ntBASIC14.14□□□□□ -0.15
NPIPA3F8WFD2 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
NPIPA3F8WFD2 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
NPIPA3F8WFD2 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC14.14□□□□□ -0.15
NPIPA3F8WFD2 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
NPIPA3F8WFD2 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
NPIPA3F8WFD2 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
NPIPA3F8WFD2 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
NPIPA3F8WFD2 MGST3-203ENST00000367885 680 ntTSL 2 BASIC14.14□□□□□ -0.15
NPIPA3F8WFD2 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
NPIPA3F8WFD2 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC14.14□□□□□ -0.15
NPIPA3F8WFD2 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
NPIPA3F8WFD2 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC14.14□□□□□ -0.15
NPIPA3F8WFD2 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
NPIPA3F8WFD2 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
NPIPA3F8WFD2 KRT43P-201ENST00000434019 910 ntBASIC14.14□□□□□ -0.15
NPIPA3F8WFD2 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC14.14□□□□□ -0.15
NPIPA3F8WFD2 CROCCP4-201ENST00000457096 498 ntBASIC14.14□□□□□ -0.15
NPIPA3F8WFD2 MDH2-205ENST00000461263 648 ntTSL 2 BASIC14.14□□□□□ -0.15
NPIPA3F8WFD2 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC14.14□□□□□ -0.15
NPIPA3F8WFD2 RPL13AP25-201ENST00000484130 612 ntBASIC14.14□□□□□ -0.15
NPIPA3F8WFD2 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC14.14□□□□□ -0.15
NPIPA3F8WFD2 TDH-203ENST00000531764 1110 ntBASIC14.14□□□□□ -0.15
NPIPA3F8WFD2 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC14.14□□□□□ -0.15
NPIPA3F8WFD2 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC14.14□□□□□ -0.15
NPIPA3F8WFD2 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC14.14□□□□□ -0.15
NPIPA3F8WFD2 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC14.14□□□□□ -0.15
NPIPA3F8WFD2 ORC6-206ENST00000568364 888 ntTSL 5 BASIC14.14□□□□□ -0.15
NPIPA3F8WFD2 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC14.14□□□□□ -0.15
NPIPA3F8WFD2 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC14.14□□□□□ -0.15
NPIPA3F8WFD2 BRI3BPP1-201ENST00000594224 787 ntBASIC14.14□□□□□ -0.15
NPIPA3F8WFD2 BTNL10-201ENST00000595971 695 ntBASIC14.14□□□□□ -0.15
NPIPA3F8WFD2 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC14.14□□□□□ -0.15
NPIPA3F8WFD2 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC14.14□□□□□ -0.15
NPIPA3F8WFD2 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
NPIPA3F8WFD2 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC14.14□□□□□ -0.15
NPIPA3F8WFD2 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
NPIPA3F8WFD2 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
NPIPA3F8WFD2 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
NPIPA3F8WFD2 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC14.14□□□□□ -0.15
NPIPA3F8WFD2 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
NPIPA3F8WFD2 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
NPIPA3F8WFD2 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
NPIPA3F8WFD2 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms