Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CTDP1Q9Y5B0 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
CTDP1Q9Y5B0 AC006449.5-201ENST00000610658 2098 ntBASIC17.91■□□□□ 0.46
CTDP1Q9Y5B0 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CTDP1Q9Y5B0 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
CTDP1Q9Y5B0 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
CTDP1Q9Y5B0 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CTDP1Q9Y5B0 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC17.91■□□□□ 0.46
CTDP1Q9Y5B0 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC17.91■□□□□ 0.46
CTDP1Q9Y5B0 YBX1P6-201ENST00000442962 1002 ntBASIC17.91■□□□□ 0.46
CTDP1Q9Y5B0 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC17.91■□□□□ 0.46
CTDP1Q9Y5B0 RPL8-205ENST00000527914 551 ntTSL 3 BASIC17.91■□□□□ 0.46
CTDP1Q9Y5B0 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC17.91■□□□□ 0.46
CTDP1Q9Y5B0 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC17.91■□□□□ 0.46
CTDP1Q9Y5B0 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CTDP1Q9Y5B0 AC244669.2-201ENST00000612320 853 ntBASIC17.91■□□□□ 0.46
CTDP1Q9Y5B0 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC17.91■□□□□ 0.46
CTDP1Q9Y5B0 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
CTDP1Q9Y5B0 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC17.91■□□□□ 0.46
CTDP1Q9Y5B0 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CTDP1Q9Y5B0 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CTDP1Q9Y5B0 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
CTDP1Q9Y5B0 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
CTDP1Q9Y5B0 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CTDP1Q9Y5B0 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
CTDP1Q9Y5B0 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CTDP1Q9Y5B0 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
CTDP1Q9Y5B0 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CTDP1Q9Y5B0 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
CTDP1Q9Y5B0 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC17.9■□□□□ 0.46
CTDP1Q9Y5B0 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
CTDP1Q9Y5B0 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC17.9■□□□□ 0.46
CTDP1Q9Y5B0 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC17.9■□□□□ 0.46
CTDP1Q9Y5B0 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CTDP1Q9Y5B0 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CTDP1Q9Y5B0 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC17.9■□□□□ 0.46
CTDP1Q9Y5B0 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CTDP1Q9Y5B0 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
CTDP1Q9Y5B0 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC17.9■□□□□ 0.46
CTDP1Q9Y5B0 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CTDP1Q9Y5B0 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC17.9■□□□□ 0.46
CTDP1Q9Y5B0 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC17.9■□□□□ 0.46
CTDP1Q9Y5B0 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CTDP1Q9Y5B0 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
CTDP1Q9Y5B0 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CTDP1Q9Y5B0 PGGT1BP2-201ENST00000398621 1028 ntBASIC17.9■□□□□ 0.46
CTDP1Q9Y5B0 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CTDP1Q9Y5B0 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC17.9■□□□□ 0.46
CTDP1Q9Y5B0 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC17.9■□□□□ 0.46
CTDP1Q9Y5B0 AP000812.2-201ENST00000538934 718 ntBASIC17.9■□□□□ 0.46
CTDP1Q9Y5B0 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC17.9■□□□□ 0.46
CTDP1Q9Y5B0 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC17.9■□□□□ 0.46
CTDP1Q9Y5B0 LARP4-220ENST00000615080 856 ntTSL 5 BASIC17.9■□□□□ 0.46
CTDP1Q9Y5B0 RHOXF1P1-202ENST00000635473 501 ntBASIC17.9■□□□□ 0.46
CTDP1Q9Y5B0 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CTDP1Q9Y5B0 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CTDP1Q9Y5B0 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CTDP1Q9Y5B0 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC17.9■□□□□ 0.46
CTDP1Q9Y5B0 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC17.9■□□□□ 0.46
CTDP1Q9Y5B0 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
CTDP1Q9Y5B0 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CTDP1Q9Y5B0 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC17.9■□□□□ 0.46
CTDP1Q9Y5B0 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC17.9■□□□□ 0.46
CTDP1Q9Y5B0 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CTDP1Q9Y5B0 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
CTDP1Q9Y5B0 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CTDP1Q9Y5B0 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CTDP1Q9Y5B0 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC17.9■□□□□ 0.46
CTDP1Q9Y5B0 ABR-205ENST00000544583 5595 ntTSL 2 BASIC17.9■□□□□ 0.46
CTDP1Q9Y5B0 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CTDP1Q9Y5B0 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
CTDP1Q9Y5B0 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.46
CTDP1Q9Y5B0 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC17.89■□□□□ 0.46
CTDP1Q9Y5B0 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC17.89■□□□□ 0.46
CTDP1Q9Y5B0 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.46
CTDP1Q9Y5B0 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC17.89■□□□□ 0.46
CTDP1Q9Y5B0 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
CTDP1Q9Y5B0 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
CTDP1Q9Y5B0 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CTDP1Q9Y5B0 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CTDP1Q9Y5B0 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC17.89■□□□□ 0.45
CTDP1Q9Y5B0 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC17.89■□□□□ 0.45
CTDP1Q9Y5B0 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
CTDP1Q9Y5B0 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CTDP1Q9Y5B0 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
CTDP1Q9Y5B0 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
CTDP1Q9Y5B0 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
CTDP1Q9Y5B0 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC17.89■□□□□ 0.45
CTDP1Q9Y5B0 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC17.89■□□□□ 0.45
CTDP1Q9Y5B0 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CTDP1Q9Y5B0 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CTDP1Q9Y5B0 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC17.89■□□□□ 0.45
CTDP1Q9Y5B0 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC17.89■□□□□ 0.45
CTDP1Q9Y5B0 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC17.89■□□□□ 0.45
CTDP1Q9Y5B0 AC010328.2-201ENST00000597698 1111 ntBASIC17.89■□□□□ 0.45
CTDP1Q9Y5B0 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
CTDP1Q9Y5B0 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CTDP1Q9Y5B0 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC17.89■□□□□ 0.45
CTDP1Q9Y5B0 KRT8P35-201ENST00000483942 1338 ntBASIC17.89■□□□□ 0.45
CTDP1Q9Y5B0 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC17.89■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms