Protein–RNA interactions for Protein: Q9Y2P8

RCL1, RNA 3'-terminal phosphate cyclase-like protein, humanhuman

Known RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1Q9Y2P8 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC12.76□□□□□ -0.37
RCL1Q9Y2P8 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC12.76□□□□□ -0.37
RCL1Q9Y2P8 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
RCL1Q9Y2P8 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC12.76□□□□□ -0.37
RCL1Q9Y2P8 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
RCL1Q9Y2P8 WASHC2A-203ENST00000351071 4642 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
RCL1Q9Y2P8 THTPA-201ENST00000288014 2860 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
RCL1Q9Y2P8 TKT-201ENST00000296289 1931 ntTSL 5 BASIC12.76□□□□□ -0.37
RCL1Q9Y2P8 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC12.76□□□□□ -0.37
RCL1Q9Y2P8 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
RCL1Q9Y2P8 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
RCL1Q9Y2P8 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
RCL1Q9Y2P8 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC12.76□□□□□ -0.37
RCL1Q9Y2P8 FAM219B-201ENST00000357635 3550 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
RCL1Q9Y2P8 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC12.76□□□□□ -0.37
RCL1Q9Y2P8 STX18-AS1-207ENST00000610009 2406 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
RCL1Q9Y2P8 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
RCL1Q9Y2P8 MED22-202ENST00000371999 987 ntTSL 3 BASIC12.76□□□□□ -0.37
RCL1Q9Y2P8 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC12.76□□□□□ -0.37
RCL1Q9Y2P8 RPS2P1-201ENST00000434010 821 ntBASIC12.76□□□□□ -0.37
RCL1Q9Y2P8 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
RCL1Q9Y2P8 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC12.76□□□□□ -0.37
RCL1Q9Y2P8 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC12.76□□□□□ -0.37
RCL1Q9Y2P8 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC12.76□□□□□ -0.37
RCL1Q9Y2P8 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
RCL1Q9Y2P8 PAM16-215ENST00000577031 548 ntTSL 4 BASIC12.76□□□□□ -0.37
RCL1Q9Y2P8 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
RCL1Q9Y2P8 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
RCL1Q9Y2P8 AL356488.2-201ENST00000602755 427 ntBASIC12.76□□□□□ -0.37
RCL1Q9Y2P8 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC12.76□□□□□ -0.37
RCL1Q9Y2P8 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC12.76□□□□□ -0.37
RCL1Q9Y2P8 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC12.76□□□□□ -0.37
RCL1Q9Y2P8 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC12.76□□□□□ -0.37
RCL1Q9Y2P8 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
RCL1Q9Y2P8 PDE8A-201ENST00000310298 3984 ntAPPRIS P4 TSL 1 (best) BASIC12.76□□□□□ -0.37
RCL1Q9Y2P8 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC12.76□□□□□ -0.37
RCL1Q9Y2P8 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
RCL1Q9Y2P8 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
RCL1Q9Y2P8 ITGB4-203ENST00000450894 5645 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
RCL1Q9Y2P8 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
RCL1Q9Y2P8 LBH-201ENST00000395323 2933 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
RCL1Q9Y2P8 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
RCL1Q9Y2P8 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC12.76□□□□□ -0.37
RCL1Q9Y2P8 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
RCL1Q9Y2P8 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC12.76□□□□□ -0.37
RCL1Q9Y2P8 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
RCL1Q9Y2P8 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC12.76□□□□□ -0.37
RCL1Q9Y2P8 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
RCL1Q9Y2P8 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC12.76□□□□□ -0.37
RCL1Q9Y2P8 AKAP12-204ENST00000402676 8432 ntAPPRIS P4 TSL 5 BASIC12.76□□□□□ -0.37
RCL1Q9Y2P8 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
RCL1Q9Y2P8 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
RCL1Q9Y2P8 DHX36-213ENST00000496811 6733 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
RCL1Q9Y2P8 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
RCL1Q9Y2P8 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
RCL1Q9Y2P8 AL928921.2-201ENST00000641325 2442 ntBASIC12.76□□□□□ -0.37
RCL1Q9Y2P8 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC12.75□□□□□ -0.37
RCL1Q9Y2P8 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
RCL1Q9Y2P8 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
RCL1Q9Y2P8 CALHM1-201ENST00000329905 3053 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
RCL1Q9Y2P8 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
RCL1Q9Y2P8 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
RCL1Q9Y2P8 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
RCL1Q9Y2P8 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
RCL1Q9Y2P8 SCUBE2-201ENST00000309263 3727 ntTSL 5 BASIC12.75□□□□□ -0.37
RCL1Q9Y2P8 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
RCL1Q9Y2P8 SYNRG-231ENST00000622045 3859 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
RCL1Q9Y2P8 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
RCL1Q9Y2P8 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC12.75□□□□□ -0.37
RCL1Q9Y2P8 CFLAR-206ENST00000395148 4415 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
RCL1Q9Y2P8 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
RCL1Q9Y2P8 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
RCL1Q9Y2P8 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
RCL1Q9Y2P8 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC12.75□□□□□ -0.37
RCL1Q9Y2P8 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
RCL1Q9Y2P8 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
RCL1Q9Y2P8 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
RCL1Q9Y2P8 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
RCL1Q9Y2P8 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
RCL1Q9Y2P8 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
RCL1Q9Y2P8 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
RCL1Q9Y2P8 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
RCL1Q9Y2P8 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
RCL1Q9Y2P8 HIST2H3DP1-201ENST00000401004 416 ntBASIC12.75□□□□□ -0.37
RCL1Q9Y2P8 COPS8-203ENST00000409334 794 ntTSL 5 BASIC12.75□□□□□ -0.37
RCL1Q9Y2P8 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC12.75□□□□□ -0.37
RCL1Q9Y2P8 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC12.75□□□□□ -0.37
RCL1Q9Y2P8 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
RCL1Q9Y2P8 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
RCL1Q9Y2P8 ATXN7L1-207ENST00000477775 2426 ntTSL 2 BASIC12.75□□□□□ -0.37
RCL1Q9Y2P8 PCDHGB8P-201ENST00000502926 1973 ntBASIC12.75□□□□□ -0.37
RCL1Q9Y2P8 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
RCL1Q9Y2P8 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
RCL1Q9Y2P8 PRYP6-201ENST00000514804 343 ntBASIC12.75□□□□□ -0.37
RCL1Q9Y2P8 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC12.75□□□□□ -0.37
RCL1Q9Y2P8 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC12.75□□□□□ -0.37
RCL1Q9Y2P8 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC12.75□□□□□ -0.37
RCL1Q9Y2P8 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC12.75□□□□□ -0.37
RCL1Q9Y2P8 THTPA-204ENST00000554970 569 ntTSL 4 BASIC12.75□□□□□ -0.37
RCL1Q9Y2P8 THTPA-206ENST00000556015 535 ntTSL 3 BASIC12.75□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms