Protein–RNA interactions for Protein: Q9Y2L9

LRCH1, Leucine-rich repeat and calponin homology domain-containing protein 1, humanhuman

Predictions only

Length 728 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH1Q9Y2L9 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
LRCH1Q9Y2L9 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
LRCH1Q9Y2L9 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
LRCH1Q9Y2L9 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC14.85□□□□□ -0.03
LRCH1Q9Y2L9 GPR132-202ENST00000392585 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
LRCH1Q9Y2L9 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
LRCH1Q9Y2L9 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC14.85□□□□□ -0.03
LRCH1Q9Y2L9 SNAP29-201ENST00000215730 4287 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
LRCH1Q9Y2L9 SAMD4B-201ENST00000314471 4519 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
LRCH1Q9Y2L9 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
LRCH1Q9Y2L9 RHOH-224ENST00000622175 2254 ntAPPRIS P1 TSL 4 BASIC14.85□□□□□ -0.03
LRCH1Q9Y2L9 TNFRSF1B-201ENST00000376259 3683 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
LRCH1Q9Y2L9 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
LRCH1Q9Y2L9 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
LRCH1Q9Y2L9 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC14.84□□□□□ -0.03
LRCH1Q9Y2L9 RIOK1-202ENST00000379834 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
LRCH1Q9Y2L9 FES-203ENST00000394302 2133 ntTSL 5 BASIC14.84□□□□□ -0.03
LRCH1Q9Y2L9 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC14.84□□□□□ -0.03
LRCH1Q9Y2L9 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
LRCH1Q9Y2L9 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
LRCH1Q9Y2L9 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
LRCH1Q9Y2L9 KLHL34-201ENST00000379499 3641 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
LRCH1Q9Y2L9 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
LRCH1Q9Y2L9 MARK1-201ENST00000366917 2946 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
LRCH1Q9Y2L9 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
LRCH1Q9Y2L9 USP4-203ENST00000415188 1454 ntTSL 3 BASIC14.84□□□□□ -0.03
LRCH1Q9Y2L9 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
LRCH1Q9Y2L9 AC130686.1-201ENST00000622936 2466 ntBASIC14.84□□□□□ -0.03
LRCH1Q9Y2L9 FAM129B-202ENST00000373314 3760 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
LRCH1Q9Y2L9 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
LRCH1Q9Y2L9 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
LRCH1Q9Y2L9 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
LRCH1Q9Y2L9 SLC19A1-201ENST00000311124 3811 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
LRCH1Q9Y2L9 DPM2-202ENST00000373110 738 ntTSL 2 BASIC14.84□□□□□ -0.03
LRCH1Q9Y2L9 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
LRCH1Q9Y2L9 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
LRCH1Q9Y2L9 AL020989.1-201ENST00000422979 469 ntBASIC14.84□□□□□ -0.03
LRCH1Q9Y2L9 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC14.84□□□□□ -0.03
LRCH1Q9Y2L9 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
LRCH1Q9Y2L9 SAPCD2P3-201ENST00000455031 850 ntBASIC14.84□□□□□ -0.03
LRCH1Q9Y2L9 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC14.84□□□□□ -0.03
LRCH1Q9Y2L9 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC14.84□□□□□ -0.03
LRCH1Q9Y2L9 BMF-207ENST00000559701 630 ntTSL 3 BASIC14.84□□□□□ -0.03
LRCH1Q9Y2L9 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC14.84□□□□□ -0.03
LRCH1Q9Y2L9 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC14.84□□□□□ -0.03
LRCH1Q9Y2L9 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
LRCH1Q9Y2L9 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC14.84□□□□□ -0.03
LRCH1Q9Y2L9 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC14.84□□□□□ -0.03
LRCH1Q9Y2L9 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
LRCH1Q9Y2L9 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
LRCH1Q9Y2L9 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC14.84□□□□□ -0.03
LRCH1Q9Y2L9 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC14.84□□□□□ -0.03
LRCH1Q9Y2L9 DYRK1B-202ENST00000348817 2448 ntTSL 5 BASIC14.84□□□□□ -0.03
LRCH1Q9Y2L9 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC14.84□□□□□ -0.03
LRCH1Q9Y2L9 DTD2-201ENST00000310850 2717 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
LRCH1Q9Y2L9 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
LRCH1Q9Y2L9 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC14.84□□□□□ -0.03
LRCH1Q9Y2L9 EXO5-201ENST00000296380 2217 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
LRCH1Q9Y2L9 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
LRCH1Q9Y2L9 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC14.84□□□□□ -0.03
LRCH1Q9Y2L9 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC14.83□□□□□ -0.03
LRCH1Q9Y2L9 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC14.83□□□□□ -0.03
LRCH1Q9Y2L9 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC14.83□□□□□ -0.03
LRCH1Q9Y2L9 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC14.83□□□□□ -0.03
LRCH1Q9Y2L9 FAM167A-201ENST00000284486 4094 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
LRCH1Q9Y2L9 TRIM10-204ENST00000449742 3546 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
LRCH1Q9Y2L9 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC14.83□□□□□ -0.03
LRCH1Q9Y2L9 ZNF674-AS1-201ENST00000421685 2078 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
LRCH1Q9Y2L9 AC083964.2-201ENST00000623988 2396 ntBASIC14.83□□□□□ -0.03
LRCH1Q9Y2L9 FAM219A-201ENST00000297620 3588 ntAPPRIS P3 TSL 2 BASIC14.83□□□□□ -0.03
LRCH1Q9Y2L9 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
LRCH1Q9Y2L9 MAPT-IT1-201ENST00000624111 3016 ntBASIC14.83□□□□□ -0.04
LRCH1Q9Y2L9 TSPEAR-AS2-202ENST00000354333 2422 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
LRCH1Q9Y2L9 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.04
LRCH1Q9Y2L9 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC14.83□□□□□ -0.04
LRCH1Q9Y2L9 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.04
LRCH1Q9Y2L9 ADCY3-202ENST00000405392 4397 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.04
LRCH1Q9Y2L9 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
LRCH1Q9Y2L9 KCTD7-201ENST00000275532 4795 ntTSL 4 BASIC14.83□□□□□ -0.04
LRCH1Q9Y2L9 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
LRCH1Q9Y2L9 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
LRCH1Q9Y2L9 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC14.83□□□□□ -0.04
LRCH1Q9Y2L9 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC14.83□□□□□ -0.04
LRCH1Q9Y2L9 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC14.83□□□□□ -0.04
LRCH1Q9Y2L9 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC14.83□□□□□ -0.04
LRCH1Q9Y2L9 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.04
LRCH1Q9Y2L9 MIR5100-201ENST00000579544 119 ntBASIC14.83□□□□□ -0.04
LRCH1Q9Y2L9 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC14.83□□□□□ -0.04
LRCH1Q9Y2L9 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC14.83□□□□□ -0.04
LRCH1Q9Y2L9 AC011467.2-201ENST00000598425 242 ntBASIC14.83□□□□□ -0.04
LRCH1Q9Y2L9 REXO1L6P-202ENST00000619970 1078 ntBASIC14.83□□□□□ -0.04
LRCH1Q9Y2L9 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC14.83□□□□□ -0.04
LRCH1Q9Y2L9 MFAP3-201ENST00000322602 2891 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
LRCH1Q9Y2L9 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
LRCH1Q9Y2L9 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC14.83□□□□□ -0.04
LRCH1Q9Y2L9 ROCK1-201ENST00000399799 9484 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
LRCH1Q9Y2L9 ST6GAL1-201ENST00000169298 4645 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
LRCH1Q9Y2L9 SEPT6-201ENST00000343984 2693 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
LRCH1Q9Y2L9 KARS-201ENST00000302445 2005 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
LRCH1Q9Y2L9 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC14.83□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 69.3 ms