Protein–RNA interactions for Protein: Q9UHC9

NPC1L1, Niemann-Pick C1-like protein 1, humanhuman

Predictions only

Length 1,359 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1Q9UHC9 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
NPC1L1Q9UHC9 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
NPC1L1Q9UHC9 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
NPC1L1Q9UHC9 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC20.59■□□□□ 0.89
NPC1L1Q9UHC9 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC20.59■□□□□ 0.89
NPC1L1Q9UHC9 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
NPC1L1Q9UHC9 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
NPC1L1Q9UHC9 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
NPC1L1Q9UHC9 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
NPC1L1Q9UHC9 OR6D1P-202ENST00000641007 5290 ntBASIC20.59■□□□□ 0.89
NPC1L1Q9UHC9 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC20.59■□□□□ 0.89
NPC1L1Q9UHC9 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
NPC1L1Q9UHC9 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
NPC1L1Q9UHC9 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
NPC1L1Q9UHC9 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC20.59■□□□□ 0.89
NPC1L1Q9UHC9 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC20.59■□□□□ 0.89
NPC1L1Q9UHC9 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
NPC1L1Q9UHC9 AC007551.1-201ENST00000457394 519 ntBASIC20.59■□□□□ 0.89
NPC1L1Q9UHC9 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC20.59■□□□□ 0.89
NPC1L1Q9UHC9 AP003171.2-201ENST00000528208 925 ntBASIC20.59■□□□□ 0.89
NPC1L1Q9UHC9 RAB43P1-201ENST00000561790 589 ntBASIC20.59■□□□□ 0.89
NPC1L1Q9UHC9 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
NPC1L1Q9UHC9 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC20.59■□□□□ 0.89
NPC1L1Q9UHC9 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC20.58■□□□□ 0.89
NPC1L1Q9UHC9 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC20.58■□□□□ 0.89
NPC1L1Q9UHC9 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
NPC1L1Q9UHC9 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
NPC1L1Q9UHC9 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
NPC1L1Q9UHC9 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC20.58■□□□□ 0.89
NPC1L1Q9UHC9 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
NPC1L1Q9UHC9 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
NPC1L1Q9UHC9 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.89
NPC1L1Q9UHC9 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
NPC1L1Q9UHC9 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
NPC1L1Q9UHC9 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
NPC1L1Q9UHC9 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
NPC1L1Q9UHC9 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
NPC1L1Q9UHC9 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
NPC1L1Q9UHC9 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
NPC1L1Q9UHC9 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC20.58■□□□□ 0.89
NPC1L1Q9UHC9 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
NPC1L1Q9UHC9 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
NPC1L1Q9UHC9 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
NPC1L1Q9UHC9 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC20.58■□□□□ 0.88
NPC1L1Q9UHC9 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
NPC1L1Q9UHC9 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
NPC1L1Q9UHC9 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
NPC1L1Q9UHC9 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC20.58■□□□□ 0.88
NPC1L1Q9UHC9 OR8S1-201ENST00000310194 1080 ntBASIC20.58■□□□□ 0.88
NPC1L1Q9UHC9 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
NPC1L1Q9UHC9 RNA5SP486-201ENST00000515961 83 ntBASIC20.58■□□□□ 0.88
NPC1L1Q9UHC9 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC20.58■□□□□ 0.88
NPC1L1Q9UHC9 HILS1-202ENST00000545329 423 ntBASIC20.58■□□□□ 0.88
NPC1L1Q9UHC9 AL008721.1-201ENST00000609964 604 ntBASIC20.58■□□□□ 0.88
NPC1L1Q9UHC9 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
NPC1L1Q9UHC9 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
NPC1L1Q9UHC9 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
NPC1L1Q9UHC9 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
NPC1L1Q9UHC9 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.88
NPC1L1Q9UHC9 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC20.57■□□□□ 0.88
NPC1L1Q9UHC9 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
NPC1L1Q9UHC9 LINC00528-201ENST00000600723 2160 ntBASIC20.57■□□□□ 0.88
NPC1L1Q9UHC9 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
NPC1L1Q9UHC9 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
NPC1L1Q9UHC9 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
NPC1L1Q9UHC9 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
NPC1L1Q9UHC9 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC20.57■□□□□ 0.88
NPC1L1Q9UHC9 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
NPC1L1Q9UHC9 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC20.57■□□□□ 0.88
NPC1L1Q9UHC9 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC20.57■□□□□ 0.88
NPC1L1Q9UHC9 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
NPC1L1Q9UHC9 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC20.57■□□□□ 0.88
NPC1L1Q9UHC9 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
NPC1L1Q9UHC9 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
NPC1L1Q9UHC9 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
NPC1L1Q9UHC9 FAM197Y7-201ENST00000432892 766 ntBASIC20.57■□□□□ 0.88
NPC1L1Q9UHC9 C2orf27AP3-201ENST00000434123 579 ntBASIC20.57■□□□□ 0.88
NPC1L1Q9UHC9 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC20.57■□□□□ 0.88
NPC1L1Q9UHC9 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC20.57■□□□□ 0.88
NPC1L1Q9UHC9 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC20.57■□□□□ 0.88
NPC1L1Q9UHC9 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC20.57■□□□□ 0.88
NPC1L1Q9UHC9 AL354718.3-201ENST00000616414 581 ntBASIC20.57■□□□□ 0.88
NPC1L1Q9UHC9 CR382287.1-201ENST00000623954 586 ntBASIC20.57■□□□□ 0.88
NPC1L1Q9UHC9 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
NPC1L1Q9UHC9 RHOXF1P1-202ENST00000635473 501 ntBASIC20.57■□□□□ 0.88
NPC1L1Q9UHC9 AC006453.4-201ENST00000636949 1252 ntBASIC20.57■□□□□ 0.88
NPC1L1Q9UHC9 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
NPC1L1Q9UHC9 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
NPC1L1Q9UHC9 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC20.56■□□□□ 0.88
NPC1L1Q9UHC9 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
NPC1L1Q9UHC9 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
NPC1L1Q9UHC9 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC20.56■□□□□ 0.88
NPC1L1Q9UHC9 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC20.56■□□□□ 0.88
NPC1L1Q9UHC9 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
NPC1L1Q9UHC9 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
NPC1L1Q9UHC9 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
NPC1L1Q9UHC9 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
NPC1L1Q9UHC9 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC20.56■□□□□ 0.88
NPC1L1Q9UHC9 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
NPC1L1Q9UHC9 CLUHP2-201ENST00000426660 1303 ntBASIC20.56■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 50.1 ms