Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
AMBRA1Q9C0C7 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
AMBRA1Q9C0C7 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC14.58□□□□□ -0.08
AMBRA1Q9C0C7 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
AMBRA1Q9C0C7 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
AMBRA1Q9C0C7 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
AMBRA1Q9C0C7 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
AMBRA1Q9C0C7 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
AMBRA1Q9C0C7 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
AMBRA1Q9C0C7 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
AMBRA1Q9C0C7 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
AMBRA1Q9C0C7 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
AMBRA1Q9C0C7 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
AMBRA1Q9C0C7 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
AMBRA1Q9C0C7 USP35-204ENST00000530267 2419 ntTSL 2 BASIC14.57□□□□□ -0.08
AMBRA1Q9C0C7 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
AMBRA1Q9C0C7 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC14.57□□□□□ -0.08
AMBRA1Q9C0C7 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
AMBRA1Q9C0C7 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
AMBRA1Q9C0C7 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC14.57□□□□□ -0.08
AMBRA1Q9C0C7 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
AMBRA1Q9C0C7 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
AMBRA1Q9C0C7 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
AMBRA1Q9C0C7 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC14.57□□□□□ -0.08
AMBRA1Q9C0C7 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC14.57□□□□□ -0.08
AMBRA1Q9C0C7 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC14.57□□□□□ -0.08
AMBRA1Q9C0C7 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC14.57□□□□□ -0.08
AMBRA1Q9C0C7 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC14.57□□□□□ -0.08
AMBRA1Q9C0C7 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
AMBRA1Q9C0C7 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC14.57□□□□□ -0.08
AMBRA1Q9C0C7 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
AMBRA1Q9C0C7 HLA-H-201ENST00000383620 1096 ntBASIC14.57□□□□□ -0.08
AMBRA1Q9C0C7 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC14.57□□□□□ -0.08
AMBRA1Q9C0C7 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC14.57□□□□□ -0.08
AMBRA1Q9C0C7 CNN2P11-201ENST00000429351 262 ntBASIC14.57□□□□□ -0.08
AMBRA1Q9C0C7 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC14.57□□□□□ -0.08
AMBRA1Q9C0C7 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC14.57□□□□□ -0.08
AMBRA1Q9C0C7 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
AMBRA1Q9C0C7 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC14.57□□□□□ -0.08
AMBRA1Q9C0C7 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
AMBRA1Q9C0C7 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
AMBRA1Q9C0C7 LINC01225-203ENST00000563550 1244 ntBASIC14.57□□□□□ -0.08
AMBRA1Q9C0C7 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC14.57□□□□□ -0.08
AMBRA1Q9C0C7 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC14.57□□□□□ -0.08
AMBRA1Q9C0C7 METTL23-205ENST00000588302 925 ntTSL 5 BASIC14.57□□□□□ -0.08
AMBRA1Q9C0C7 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
AMBRA1Q9C0C7 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC14.57□□□□□ -0.08
AMBRA1Q9C0C7 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC14.57□□□□□ -0.08
AMBRA1Q9C0C7 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
AMBRA1Q9C0C7 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC14.57□□□□□ -0.08
AMBRA1Q9C0C7 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
AMBRA1Q9C0C7 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
AMBRA1Q9C0C7 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
AMBRA1Q9C0C7 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC14.57□□□□□ -0.08
AMBRA1Q9C0C7 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC14.57□□□□□ -0.08
AMBRA1Q9C0C7 C1R-201ENST00000535233 2211 ntTSL 2 BASIC14.57□□□□□ -0.08
AMBRA1Q9C0C7 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC14.57□□□□□ -0.08
AMBRA1Q9C0C7 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
AMBRA1Q9C0C7 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC14.57□□□□□ -0.08
AMBRA1Q9C0C7 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
AMBRA1Q9C0C7 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
AMBRA1Q9C0C7 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC14.56□□□□□ -0.08
AMBRA1Q9C0C7 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
AMBRA1Q9C0C7 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
AMBRA1Q9C0C7 OS9-207ENST00000439210 1946 ntTSL 2 BASIC14.56□□□□□ -0.08
AMBRA1Q9C0C7 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC14.56□□□□□ -0.08
AMBRA1Q9C0C7 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
AMBRA1Q9C0C7 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
AMBRA1Q9C0C7 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
AMBRA1Q9C0C7 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC14.56□□□□□ -0.08
AMBRA1Q9C0C7 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
AMBRA1Q9C0C7 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
AMBRA1Q9C0C7 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
AMBRA1Q9C0C7 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
AMBRA1Q9C0C7 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
AMBRA1Q9C0C7 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
AMBRA1Q9C0C7 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
AMBRA1Q9C0C7 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
AMBRA1Q9C0C7 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC14.56□□□□□ -0.08
AMBRA1Q9C0C7 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC14.56□□□□□ -0.08
AMBRA1Q9C0C7 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
AMBRA1Q9C0C7 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
AMBRA1Q9C0C7 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC14.56□□□□□ -0.08
AMBRA1Q9C0C7 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
AMBRA1Q9C0C7 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC14.56□□□□□ -0.08
AMBRA1Q9C0C7 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
AMBRA1Q9C0C7 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC14.56□□□□□ -0.08
AMBRA1Q9C0C7 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC14.56□□□□□ -0.08
AMBRA1Q9C0C7 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
AMBRA1Q9C0C7 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
AMBRA1Q9C0C7 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
AMBRA1Q9C0C7 AC004461.1-201ENST00000412461 403 ntBASIC14.56□□□□□ -0.08
AMBRA1Q9C0C7 PON3-203ENST00000427422 894 ntTSL 3 BASIC14.56□□□□□ -0.08
AMBRA1Q9C0C7 SPCS2P4-201ENST00000436160 681 ntBASIC14.56□□□□□ -0.08
AMBRA1Q9C0C7 ELP6-209ENST00000446787 894 ntTSL 3 BASIC14.56□□□□□ -0.08
AMBRA1Q9C0C7 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC14.56□□□□□ -0.08
AMBRA1Q9C0C7 SPDYE11-202ENST00000450699 704 ntBASIC14.56□□□□□ -0.08
AMBRA1Q9C0C7 CYMP-203ENST00000474680 1263 ntBASIC14.56□□□□□ -0.08
AMBRA1Q9C0C7 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC14.56□□□□□ -0.08
AMBRA1Q9C0C7 KRT8P48-201ENST00000515599 1220 ntBASIC14.56□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms