Protein–RNA interactions for Protein: Q9BYR8

KRTAP3-1, Keratin-associated protein 3-1, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-1Q9BYR8 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC7.96□□□□□ -1.13
KRTAP3-1Q9BYR8 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC7.96□□□□□ -1.13
KRTAP3-1Q9BYR8 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC7.96□□□□□ -1.13
KRTAP3-1Q9BYR8 FES-203ENST00000394302 2133 ntTSL 5 BASIC7.96□□□□□ -1.13
KRTAP3-1Q9BYR8 AP000845.1-201ENST00000581677 2131 ntBASIC7.96□□□□□ -1.13
KRTAP3-1Q9BYR8 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC7.96□□□□□ -1.13
KRTAP3-1Q9BYR8 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.13
KRTAP3-1Q9BYR8 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.13
KRTAP3-1Q9BYR8 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.13
KRTAP3-1Q9BYR8 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC7.96□□□□□ -1.13
KRTAP3-1Q9BYR8 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.13
KRTAP3-1Q9BYR8 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.13
KRTAP3-1Q9BYR8 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC7.96□□□□□ -1.13
KRTAP3-1Q9BYR8 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC7.96□□□□□ -1.13
KRTAP3-1Q9BYR8 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
KRTAP3-1Q9BYR8 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
KRTAP3-1Q9BYR8 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
KRTAP3-1Q9BYR8 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC7.96□□□□□ -1.14
KRTAP3-1Q9BYR8 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
KRTAP3-1Q9BYR8 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
KRTAP3-1Q9BYR8 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
KRTAP3-1Q9BYR8 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
KRTAP3-1Q9BYR8 IL36B-201ENST00000259213 1186 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
KRTAP3-1Q9BYR8 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC7.96□□□□□ -1.14
KRTAP3-1Q9BYR8 OR5B12-201ENST00000302572 1054 ntAPPRIS P1 BASIC7.96□□□□□ -1.14
KRTAP3-1Q9BYR8 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
KRTAP3-1Q9BYR8 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
KRTAP3-1Q9BYR8 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC7.96□□□□□ -1.14
KRTAP3-1Q9BYR8 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC7.96□□□□□ -1.14
KRTAP3-1Q9BYR8 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC7.96□□□□□ -1.14
KRTAP3-1Q9BYR8 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC7.96□□□□□ -1.14
KRTAP3-1Q9BYR8 AC136604.1-201ENST00000418535 575 ntBASIC7.96□□□□□ -1.14
KRTAP3-1Q9BYR8 AC142381.1-201ENST00000426099 345 ntBASIC7.96□□□□□ -1.14
KRTAP3-1Q9BYR8 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
KRTAP3-1Q9BYR8 ANAPC10-202ENST00000451299 928 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
KRTAP3-1Q9BYR8 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
KRTAP3-1Q9BYR8 MTCO3P42-201ENST00000509488 518 ntBASIC7.96□□□□□ -1.14
KRTAP3-1Q9BYR8 MTCO3P39-201ENST00000514812 518 ntBASIC7.96□□□□□ -1.14
KRTAP3-1Q9BYR8 RNF139-AS1-202ENST00000519861 359 ntTSL 3 BASIC7.96□□□□□ -1.14
KRTAP3-1Q9BYR8 AC105233.2-201ENST00000523697 349 ntBASIC7.96□□□□□ -1.14
KRTAP3-1Q9BYR8 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC7.96□□□□□ -1.14
KRTAP3-1Q9BYR8 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC7.96□□□□□ -1.14
KRTAP3-1Q9BYR8 AF228730.5-201ENST00000530288 346 ntBASIC7.96□□□□□ -1.14
KRTAP3-1Q9BYR8 CD63-204ENST00000546939 779 ntTSL 3 BASIC7.96□□□□□ -1.14
KRTAP3-1Q9BYR8 CD63-210ENST00000550776 870 ntTSL 5 BASIC7.96□□□□□ -1.14
KRTAP3-1Q9BYR8 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC7.96□□□□□ -1.14
KRTAP3-1Q9BYR8 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC7.96□□□□□ -1.14
KRTAP3-1Q9BYR8 INO80E-210ENST00000567705 880 ntTSL 3 BASIC7.96□□□□□ -1.14
KRTAP3-1Q9BYR8 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
KRTAP3-1Q9BYR8 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC7.96□□□□□ -1.14
KRTAP3-1Q9BYR8 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC7.96□□□□□ -1.14
KRTAP3-1Q9BYR8 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
KRTAP3-1Q9BYR8 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
KRTAP3-1Q9BYR8 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC7.96□□□□□ -1.14
KRTAP3-1Q9BYR8 NKG7-205ENST00000600427 520 ntTSL 3 BASIC7.96□□□□□ -1.14
KRTAP3-1Q9BYR8 AC104692.2-201ENST00000603054 253 ntBASIC7.96□□□□□ -1.14
KRTAP3-1Q9BYR8 AC097065.2-201ENST00000608159 533 ntBASIC7.96□□□□□ -1.14
KRTAP3-1Q9BYR8 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC7.96□□□□□ -1.14
KRTAP3-1Q9BYR8 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC7.96□□□□□ -1.14
KRTAP3-1Q9BYR8 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC7.96□□□□□ -1.14
KRTAP3-1Q9BYR8 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC7.96□□□□□ -1.14
KRTAP3-1Q9BYR8 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC7.96□□□□□ -1.14
KRTAP3-1Q9BYR8 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC7.96□□□□□ -1.14
KRTAP3-1Q9BYR8 OR6C71P-202ENST00000641886 1107 ntBASIC7.96□□□□□ -1.14
KRTAP3-1Q9BYR8 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
KRTAP3-1Q9BYR8 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC7.96□□□□□ -1.14
KRTAP3-1Q9BYR8 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC7.96□□□□□ -1.14
KRTAP3-1Q9BYR8 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
KRTAP3-1Q9BYR8 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
KRTAP3-1Q9BYR8 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC7.96□□□□□ -1.14
KRTAP3-1Q9BYR8 SLC9A7P1-202ENST00000556476 2239 ntBASIC7.96□□□□□ -1.14
KRTAP3-1Q9BYR8 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC7.96□□□□□ -1.14
KRTAP3-1Q9BYR8 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC7.96□□□□□ -1.14
KRTAP3-1Q9BYR8 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC7.96□□□□□ -1.14
KRTAP3-1Q9BYR8 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC7.96□□□□□ -1.14
KRTAP3-1Q9BYR8 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC7.96□□□□□ -1.14
KRTAP3-1Q9BYR8 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
KRTAP3-1Q9BYR8 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC7.96□□□□□ -1.14
KRTAP3-1Q9BYR8 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC7.96□□□□□ -1.14
KRTAP3-1Q9BYR8 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
KRTAP3-1Q9BYR8 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
KRTAP3-1Q9BYR8 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
KRTAP3-1Q9BYR8 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
KRTAP3-1Q9BYR8 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC7.96□□□□□ -1.14
KRTAP3-1Q9BYR8 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC7.96□□□□□ -1.14
KRTAP3-1Q9BYR8 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC7.96□□□□□ -1.14
KRTAP3-1Q9BYR8 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
KRTAP3-1Q9BYR8 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
KRTAP3-1Q9BYR8 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
KRTAP3-1Q9BYR8 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC7.96□□□□□ -1.14
KRTAP3-1Q9BYR8 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
KRTAP3-1Q9BYR8 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
KRTAP3-1Q9BYR8 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC7.96□□□□□ -1.14
KRTAP3-1Q9BYR8 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
KRTAP3-1Q9BYR8 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
KRTAP3-1Q9BYR8 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
KRTAP3-1Q9BYR8 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
KRTAP3-1Q9BYR8 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
KRTAP3-1Q9BYR8 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC7.96□□□□□ -1.14
KRTAP3-1Q9BYR8 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
Retrieved 100 of 98,524 protein–RNA pairs in 52.9 ms