Protein–RNA interactions for Protein: Q99990

VGLL1, Transcription cofactor vestigial-like protein 1, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL1Q99990 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
VGLL1Q99990 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC11.84□□□□□ -0.51
VGLL1Q99990 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC11.84□□□□□ -0.51
VGLL1Q99990 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC11.84□□□□□ -0.51
VGLL1Q99990 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC11.84□□□□□ -0.51
VGLL1Q99990 AGBL3-202ENST00000435976 2495 ntTSL 5 BASIC11.84□□□□□ -0.51
VGLL1Q99990 CARHSP1-220ENST00000619881 2849 ntAPPRIS P1 TSL 3 BASIC11.84□□□□□ -0.51
VGLL1Q99990 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
VGLL1Q99990 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC11.84□□□□□ -0.51
VGLL1Q99990 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC11.84□□□□□ -0.51
VGLL1Q99990 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
VGLL1Q99990 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
VGLL1Q99990 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC11.84□□□□□ -0.51
VGLL1Q99990 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC11.84□□□□□ -0.51
VGLL1Q99990 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
VGLL1Q99990 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC11.84□□□□□ -0.51
VGLL1Q99990 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
VGLL1Q99990 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC11.84□□□□□ -0.51
VGLL1Q99990 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
VGLL1Q99990 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
VGLL1Q99990 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC11.84□□□□□ -0.51
VGLL1Q99990 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC11.84□□□□□ -0.51
VGLL1Q99990 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
VGLL1Q99990 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
VGLL1Q99990 NEK7-201ENST00000367383 586 ntTSL 2 BASIC11.84□□□□□ -0.51
VGLL1Q99990 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC11.84□□□□□ -0.51
VGLL1Q99990 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC11.84□□□□□ -0.51
VGLL1Q99990 ELP6-209ENST00000446787 894 ntTSL 3 BASIC11.84□□□□□ -0.51
VGLL1Q99990 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC11.84□□□□□ -0.51
VGLL1Q99990 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC11.84□□□□□ -0.51
VGLL1Q99990 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC11.84□□□□□ -0.51
VGLL1Q99990 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC11.84□□□□□ -0.51
VGLL1Q99990 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC11.84□□□□□ -0.51
VGLL1Q99990 RNA5SP416-201ENST00000516838 111 ntBASIC11.84□□□□□ -0.51
VGLL1Q99990 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC11.84□□□□□ -0.51
VGLL1Q99990 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC11.84□□□□□ -0.51
VGLL1Q99990 INO80E-210ENST00000567705 880 ntTSL 3 BASIC11.84□□□□□ -0.51
VGLL1Q99990 IGHV3OR16-6-201ENST00000568775 360 ntBASIC11.84□□□□□ -0.51
VGLL1Q99990 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC11.84□□□□□ -0.51
VGLL1Q99990 FLI1-201ENST00000281428 4151 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
VGLL1Q99990 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
VGLL1Q99990 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
VGLL1Q99990 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
VGLL1Q99990 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC11.84□□□□□ -0.51
VGLL1Q99990 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC11.84□□□□□ -0.51
VGLL1Q99990 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC11.84□□□□□ -0.51
VGLL1Q99990 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC11.84□□□□□ -0.51
VGLL1Q99990 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
VGLL1Q99990 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC11.84□□□□□ -0.51
VGLL1Q99990 FGD5P1-202ENST00000614866 2498 ntBASIC11.84□□□□□ -0.51
VGLL1Q99990 KDM6B-201ENST00000254846 6713 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
VGLL1Q99990 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
VGLL1Q99990 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
VGLL1Q99990 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
VGLL1Q99990 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC11.84□□□□□ -0.51
VGLL1Q99990 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
VGLL1Q99990 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
VGLL1Q99990 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC11.84□□□□□ -0.51
VGLL1Q99990 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC11.84□□□□□ -0.51
VGLL1Q99990 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC11.84□□□□□ -0.51
VGLL1Q99990 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
VGLL1Q99990 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
VGLL1Q99990 YTHDF3-205ENST00000539294 5163 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
VGLL1Q99990 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC11.84□□□□□ -0.51
VGLL1Q99990 IL9RP2-201ENST00000423948 1312 ntBASIC11.84□□□□□ -0.51
VGLL1Q99990 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC11.84□□□□□ -0.51
VGLL1Q99990 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
VGLL1Q99990 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC11.84□□□□□ -0.51
VGLL1Q99990 COL20A1-203ENST00000422202 8097 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.51
VGLL1Q99990 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC11.83□□□□□ -0.52
VGLL1Q99990 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC11.83□□□□□ -0.52
VGLL1Q99990 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
VGLL1Q99990 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
VGLL1Q99990 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
VGLL1Q99990 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC11.83□□□□□ -0.52
VGLL1Q99990 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
VGLL1Q99990 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.52
VGLL1Q99990 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
VGLL1Q99990 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
VGLL1Q99990 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
VGLL1Q99990 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
VGLL1Q99990 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC11.83□□□□□ -0.52
VGLL1Q99990 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
VGLL1Q99990 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
VGLL1Q99990 AC005252.3-201ENST00000623855 2258 ntBASIC11.83□□□□□ -0.52
VGLL1Q99990 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
VGLL1Q99990 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
VGLL1Q99990 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC11.83□□□□□ -0.52
VGLL1Q99990 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC11.83□□□□□ -0.52
VGLL1Q99990 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC11.83□□□□□ -0.52
VGLL1Q99990 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
VGLL1Q99990 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
VGLL1Q99990 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
VGLL1Q99990 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
VGLL1Q99990 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
VGLL1Q99990 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
VGLL1Q99990 HLA-H-201ENST00000383620 1096 ntBASIC11.83□□□□□ -0.52
VGLL1Q99990 HNRNPA1P28-201ENST00000424481 961 ntBASIC11.83□□□□□ -0.52
VGLL1Q99990 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC11.83□□□□□ -0.52
VGLL1Q99990 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC11.83□□□□□ -0.52
Retrieved 100 of 98,524 protein–RNA pairs in 50.7 ms