Protein–RNA interactions for Protein: Q96RK4

BBS4, Bardet-Biedl syndrome 4 protein, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4Q96RK4 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC14.78□□□□□ -0.04
BBS4Q96RK4 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
BBS4Q96RK4 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC14.78□□□□□ -0.04
BBS4Q96RK4 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
BBS4Q96RK4 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
BBS4Q96RK4 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
BBS4Q96RK4 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC14.78□□□□□ -0.04
BBS4Q96RK4 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
BBS4Q96RK4 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC14.78□□□□□ -0.04
BBS4Q96RK4 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
BBS4Q96RK4 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
BBS4Q96RK4 Z97205.2-201ENST00000564697 1639 ntBASIC14.77□□□□□ -0.04
BBS4Q96RK4 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
BBS4Q96RK4 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
BBS4Q96RK4 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
BBS4Q96RK4 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
BBS4Q96RK4 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC14.77□□□□□ -0.04
BBS4Q96RK4 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC14.77□□□□□ -0.04
BBS4Q96RK4 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC14.77□□□□□ -0.04
BBS4Q96RK4 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC14.77□□□□□ -0.04
BBS4Q96RK4 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
BBS4Q96RK4 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
BBS4Q96RK4 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
BBS4Q96RK4 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC14.77□□□□□ -0.04
BBS4Q96RK4 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
BBS4Q96RK4 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC14.77□□□□□ -0.04
BBS4Q96RK4 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.04
BBS4Q96RK4 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
BBS4Q96RK4 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.04
BBS4Q96RK4 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.04
BBS4Q96RK4 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
BBS4Q96RK4 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
BBS4Q96RK4 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC14.77□□□□□ -0.04
BBS4Q96RK4 AC067750.1-201ENST00000608826 6545 ntBASIC14.77□□□□□ -0.04
BBS4Q96RK4 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
BBS4Q96RK4 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
BBS4Q96RK4 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
BBS4Q96RK4 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
BBS4Q96RK4 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
BBS4Q96RK4 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC14.77□□□□□ -0.05
BBS4Q96RK4 MIR943-201ENST00000401286 94 ntBASIC14.77□□□□□ -0.05
BBS4Q96RK4 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC14.77□□□□□ -0.05
BBS4Q96RK4 TREML5P-201ENST00000421694 576 ntBASIC14.77□□□□□ -0.05
BBS4Q96RK4 PON3-203ENST00000427422 894 ntTSL 3 BASIC14.77□□□□□ -0.05
BBS4Q96RK4 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
BBS4Q96RK4 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC14.77□□□□□ -0.05
BBS4Q96RK4 SDHAP3-202ENST00000515467 728 ntBASIC14.77□□□□□ -0.05
BBS4Q96RK4 LY6E-204ENST00000519546 971 ntTSL 2 BASIC14.77□□□□□ -0.05
BBS4Q96RK4 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
BBS4Q96RK4 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC14.77□□□□□ -0.05
BBS4Q96RK4 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC14.77□□□□□ -0.05
BBS4Q96RK4 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC14.77□□□□□ -0.05
BBS4Q96RK4 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
BBS4Q96RK4 RAB34-223ENST00000636154 730 ntTSL 2 BASIC14.77□□□□□ -0.05
BBS4Q96RK4 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC14.77□□□□□ -0.05
BBS4Q96RK4 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
BBS4Q96RK4 STK33-217ENST00000534493 1895 ntTSL 2 BASIC14.77□□□□□ -0.05
BBS4Q96RK4 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
BBS4Q96RK4 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
BBS4Q96RK4 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
BBS4Q96RK4 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC14.77□□□□□ -0.05
BBS4Q96RK4 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
BBS4Q96RK4 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
BBS4Q96RK4 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC14.77□□□□□ -0.05
BBS4Q96RK4 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC14.77□□□□□ -0.05
BBS4Q96RK4 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
BBS4Q96RK4 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC14.77□□□□□ -0.05
BBS4Q96RK4 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
BBS4Q96RK4 MARC1-201ENST00000366910 7439 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
BBS4Q96RK4 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
BBS4Q96RK4 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC14.77□□□□□ -0.05
BBS4Q96RK4 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC14.76□□□□□ -0.05
BBS4Q96RK4 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
BBS4Q96RK4 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
BBS4Q96RK4 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC14.76□□□□□ -0.05
BBS4Q96RK4 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC14.76□□□□□ -0.05
BBS4Q96RK4 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
BBS4Q96RK4 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
BBS4Q96RK4 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
BBS4Q96RK4 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
BBS4Q96RK4 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
BBS4Q96RK4 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
BBS4Q96RK4 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC14.76□□□□□ -0.05
BBS4Q96RK4 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC14.76□□□□□ -0.05
BBS4Q96RK4 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
BBS4Q96RK4 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
BBS4Q96RK4 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
BBS4Q96RK4 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
BBS4Q96RK4 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
BBS4Q96RK4 AC148477.4-201ENST00000613430 1793 ntBASIC14.76□□□□□ -0.05
BBS4Q96RK4 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
BBS4Q96RK4 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
BBS4Q96RK4 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
BBS4Q96RK4 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
BBS4Q96RK4 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC14.76□□□□□ -0.05
BBS4Q96RK4 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
BBS4Q96RK4 HNRNPA3P1-201ENST00000401429 1139 ntBASIC14.76□□□□□ -0.05
BBS4Q96RK4 HLA-DRB6-201ENST00000411500 1235 ntBASIC14.76□□□□□ -0.05
BBS4Q96RK4 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC14.76□□□□□ -0.05
BBS4Q96RK4 HNRNPA3P5-201ENST00000455201 833 ntBASIC14.76□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms