Protein–RNA interactions for Protein: Q96PY6

NEK1, Serine/threonine-protein kinase Nek1, humanhuman

Predictions only

Length 1,258 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1Q96PY6 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC18.36■□□□□ 0.53
NEK1Q96PY6 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC18.36■□□□□ 0.53
NEK1Q96PY6 TMPRSS11CP-201ENST00000453277 683 ntBASIC18.36■□□□□ 0.53
NEK1Q96PY6 UGT1A2P-201ENST00000454886 866 ntBASIC18.36■□□□□ 0.53
NEK1Q96PY6 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC18.36■□□□□ 0.53
NEK1Q96PY6 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC18.36■□□□□ 0.53
NEK1Q96PY6 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC18.36■□□□□ 0.53
NEK1Q96PY6 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
NEK1Q96PY6 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC18.36■□□□□ 0.53
NEK1Q96PY6 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
NEK1Q96PY6 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
NEK1Q96PY6 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
NEK1Q96PY6 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
NEK1Q96PY6 NORAD-201ENST00000565493 5339 ntBASIC18.36■□□□□ 0.53
NEK1Q96PY6 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
NEK1Q96PY6 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
NEK1Q96PY6 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC18.36■□□□□ 0.53
NEK1Q96PY6 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC18.36■□□□□ 0.53
NEK1Q96PY6 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
NEK1Q96PY6 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC18.35■□□□□ 0.53
NEK1Q96PY6 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
NEK1Q96PY6 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC18.35■□□□□ 0.53
NEK1Q96PY6 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
NEK1Q96PY6 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC18.35■□□□□ 0.53
NEK1Q96PY6 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
NEK1Q96PY6 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
NEK1Q96PY6 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
NEK1Q96PY6 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
NEK1Q96PY6 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
NEK1Q96PY6 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
NEK1Q96PY6 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
NEK1Q96PY6 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
NEK1Q96PY6 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
NEK1Q96PY6 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
NEK1Q96PY6 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC18.35■□□□□ 0.53
NEK1Q96PY6 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
NEK1Q96PY6 RHOA-206ENST00000454011 889 ntTSL 2 BASIC18.35■□□□□ 0.53
NEK1Q96PY6 INGX-202ENST00000489074 768 ntBASIC18.35■□□□□ 0.53
NEK1Q96PY6 DOC2GP-202ENST00000514950 1163 ntBASIC18.35■□□□□ 0.53
NEK1Q96PY6 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC18.35■□□□□ 0.53
NEK1Q96PY6 AC023310.3-201ENST00000557027 670 ntBASIC18.35■□□□□ 0.53
NEK1Q96PY6 AC100756.1-201ENST00000562736 682 ntBASIC18.35■□□□□ 0.53
NEK1Q96PY6 RARRES2P5-201ENST00000564013 466 ntBASIC18.35■□□□□ 0.53
NEK1Q96PY6 AC138749.3-201ENST00000567691 622 ntBASIC18.35■□□□□ 0.53
NEK1Q96PY6 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC18.35■□□□□ 0.53
NEK1Q96PY6 AC116165.1-201ENST00000611806 668 ntBASIC18.35■□□□□ 0.53
NEK1Q96PY6 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC18.35■□□□□ 0.53
NEK1Q96PY6 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
NEK1Q96PY6 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
NEK1Q96PY6 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
NEK1Q96PY6 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
NEK1Q96PY6 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
NEK1Q96PY6 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
NEK1Q96PY6 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC18.35■□□□□ 0.53
NEK1Q96PY6 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
NEK1Q96PY6 TPO-203ENST00000346956 2923 ntTSL 5 BASIC18.35■□□□□ 0.53
NEK1Q96PY6 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
NEK1Q96PY6 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
NEK1Q96PY6 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
NEK1Q96PY6 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
NEK1Q96PY6 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
NEK1Q96PY6 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
NEK1Q96PY6 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
NEK1Q96PY6 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
NEK1Q96PY6 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC18.34■□□□□ 0.53
NEK1Q96PY6 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
NEK1Q96PY6 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
NEK1Q96PY6 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC18.34■□□□□ 0.53
NEK1Q96PY6 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
NEK1Q96PY6 LINC00528-201ENST00000600723 2160 ntBASIC18.34■□□□□ 0.53
NEK1Q96PY6 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
NEK1Q96PY6 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
NEK1Q96PY6 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC18.34■□□□□ 0.53
NEK1Q96PY6 WASH3P-207ENST00000560956 1394 ntBASIC18.34■□□□□ 0.53
NEK1Q96PY6 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
NEK1Q96PY6 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
NEK1Q96PY6 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
NEK1Q96PY6 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
NEK1Q96PY6 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
NEK1Q96PY6 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
NEK1Q96PY6 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
NEK1Q96PY6 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
NEK1Q96PY6 HNRNPA1P40-201ENST00000426371 1278 ntBASIC18.34■□□□□ 0.53
NEK1Q96PY6 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC18.34■□□□□ 0.53
NEK1Q96PY6 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC18.34■□□□□ 0.53
NEK1Q96PY6 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC18.34■□□□□ 0.53
NEK1Q96PY6 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
NEK1Q96PY6 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC18.34■□□□□ 0.53
NEK1Q96PY6 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
NEK1Q96PY6 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
NEK1Q96PY6 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
NEK1Q96PY6 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
NEK1Q96PY6 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC18.34■□□□□ 0.53
NEK1Q96PY6 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
NEK1Q96PY6 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
NEK1Q96PY6 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
NEK1Q96PY6 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
NEK1Q96PY6 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
NEK1Q96PY6 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
NEK1Q96PY6 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms