Protein–RNA interactions for Protein: Q96IS3

RAX2, Retina and anterior neural fold homeobox protein 2, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAX2Q96IS3 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC12.18□□□□□ -0.46
RAX2Q96IS3 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
RAX2Q96IS3 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
RAX2Q96IS3 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
RAX2Q96IS3 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
RAX2Q96IS3 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
RAX2Q96IS3 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC12.18□□□□□ -0.46
RAX2Q96IS3 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC12.18□□□□□ -0.46
RAX2Q96IS3 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
RAX2Q96IS3 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC12.18□□□□□ -0.46
RAX2Q96IS3 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
RAX2Q96IS3 GIMAP3P-201ENST00000495150 836 ntBASIC12.18□□□□□ -0.46
RAX2Q96IS3 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
RAX2Q96IS3 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
RAX2Q96IS3 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC12.18□□□□□ -0.46
RAX2Q96IS3 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC12.18□□□□□ -0.46
RAX2Q96IS3 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
RAX2Q96IS3 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC12.18□□□□□ -0.46
RAX2Q96IS3 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC12.18□□□□□ -0.46
RAX2Q96IS3 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
RAX2Q96IS3 AC132938.2-201ENST00000579188 680 ntBASIC12.18□□□□□ -0.46
RAX2Q96IS3 MIR8072-201ENST00000614241 80 ntBASIC12.18□□□□□ -0.46
RAX2Q96IS3 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC12.18□□□□□ -0.46
RAX2Q96IS3 AL591163.1-201ENST00000641757 987 ntBASIC12.18□□□□□ -0.46
RAX2Q96IS3 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
RAX2Q96IS3 PID1-202ENST00000392054 2745 ntTSL 2 BASIC12.18□□□□□ -0.46
RAX2Q96IS3 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
RAX2Q96IS3 PLIN4-202ENST00000633942 6484 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
RAX2Q96IS3 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
RAX2Q96IS3 VILL-207ENST00000465644 1857 ntTSL 5 BASIC12.18□□□□□ -0.46
RAX2Q96IS3 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
RAX2Q96IS3 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC12.18□□□□□ -0.46
RAX2Q96IS3 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC12.18□□□□□ -0.46
RAX2Q96IS3 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC12.18□□□□□ -0.46
RAX2Q96IS3 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
RAX2Q96IS3 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
RAX2Q96IS3 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC12.18□□□□□ -0.46
RAX2Q96IS3 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
RAX2Q96IS3 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC12.18□□□□□ -0.46
RAX2Q96IS3 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
RAX2Q96IS3 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC12.18□□□□□ -0.46
RAX2Q96IS3 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
RAX2Q96IS3 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
RAX2Q96IS3 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
RAX2Q96IS3 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
RAX2Q96IS3 SETD1A-201ENST00000262519 6451 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
RAX2Q96IS3 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
RAX2Q96IS3 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC12.17□□□□□ -0.46
RAX2Q96IS3 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
RAX2Q96IS3 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
RAX2Q96IS3 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
RAX2Q96IS3 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
RAX2Q96IS3 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC12.17□□□□□ -0.46
RAX2Q96IS3 OR2I1P-210ENST00000642037 4691 ntBASIC12.17□□□□□ -0.46
RAX2Q96IS3 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
RAX2Q96IS3 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC12.17□□□□□ -0.46
RAX2Q96IS3 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
RAX2Q96IS3 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
RAX2Q96IS3 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
RAX2Q96IS3 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
RAX2Q96IS3 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
RAX2Q96IS3 USP40-206ENST00000443711 628 ntTSL 2 BASIC12.17□□□□□ -0.46
RAX2Q96IS3 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC12.17□□□□□ -0.46
RAX2Q96IS3 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC12.17□□□□□ -0.46
RAX2Q96IS3 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
RAX2Q96IS3 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
RAX2Q96IS3 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC12.17□□□□□ -0.46
RAX2Q96IS3 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC12.17□□□□□ -0.46
RAX2Q96IS3 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC12.17□□□□□ -0.46
RAX2Q96IS3 AC036164.1-201ENST00000570544 333 ntBASIC12.17□□□□□ -0.46
RAX2Q96IS3 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC12.17□□□□□ -0.46
RAX2Q96IS3 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC12.17□□□□□ -0.46
RAX2Q96IS3 TMEM261P1-201ENST00000604899 340 ntBASIC12.17□□□□□ -0.46
RAX2Q96IS3 AL158212.4-201ENST00000624062 1286 ntBASIC12.17□□□□□ -0.46
RAX2Q96IS3 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC12.17□□□□□ -0.46
RAX2Q96IS3 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC12.17□□□□□ -0.46
RAX2Q96IS3 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
RAX2Q96IS3 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC12.17□□□□□ -0.46
RAX2Q96IS3 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
RAX2Q96IS3 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC12.17□□□□□ -0.46
RAX2Q96IS3 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
RAX2Q96IS3 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
RAX2Q96IS3 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC12.17□□□□□ -0.46
RAX2Q96IS3 GABPA-202ENST00000400075 4814 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
RAX2Q96IS3 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC12.17□□□□□ -0.46
RAX2Q96IS3 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC12.17□□□□□ -0.46
RAX2Q96IS3 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
RAX2Q96IS3 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
RAX2Q96IS3 GCK-209ENST00000616242 2260 ntTSL 5 BASIC12.17□□□□□ -0.46
RAX2Q96IS3 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC12.17□□□□□ -0.46
RAX2Q96IS3 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
RAX2Q96IS3 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
RAX2Q96IS3 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
RAX2Q96IS3 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
RAX2Q96IS3 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC12.17□□□□□ -0.46
RAX2Q96IS3 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
RAX2Q96IS3 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC12.17□□□□□ -0.46
RAX2Q96IS3 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
RAX2Q96IS3 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
RAX2Q96IS3 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 62 ms