Protein–RNA interactions for Protein: Q96FT9

IFT43, Intraflagellar transport protein 43 homolog, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43Q96FT9 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC16.07■□□□□ 0.16
IFT43Q96FT9 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
IFT43Q96FT9 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC16.07■□□□□ 0.16
IFT43Q96FT9 RAC2-202ENST00000401529 569 ntTSL 4 BASIC16.07■□□□□ 0.16
IFT43Q96FT9 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC16.07■□□□□ 0.16
IFT43Q96FT9 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
IFT43Q96FT9 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC16.07■□□□□ 0.16
IFT43Q96FT9 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC16.07■□□□□ 0.16
IFT43Q96FT9 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC16.07■□□□□ 0.16
IFT43Q96FT9 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
IFT43Q96FT9 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
IFT43Q96FT9 AC009407.1-201ENST00000568958 598 ntBASIC16.07■□□□□ 0.16
IFT43Q96FT9 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC16.07■□□□□ 0.16
IFT43Q96FT9 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC16.07■□□□□ 0.16
IFT43Q96FT9 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
IFT43Q96FT9 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
IFT43Q96FT9 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
IFT43Q96FT9 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
IFT43Q96FT9 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
IFT43Q96FT9 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
IFT43Q96FT9 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
IFT43Q96FT9 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC16.07■□□□□ 0.16
IFT43Q96FT9 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
IFT43Q96FT9 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
IFT43Q96FT9 DKFZP434H168-201ENST00000567381 1905 ntBASIC16.07■□□□□ 0.16
IFT43Q96FT9 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
IFT43Q96FT9 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
IFT43Q96FT9 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
IFT43Q96FT9 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC16.07■□□□□ 0.16
IFT43Q96FT9 CICP14-201ENST00000629111 2732 ntBASIC16.07■□□□□ 0.16
IFT43Q96FT9 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC16.07■□□□□ 0.16
IFT43Q96FT9 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
IFT43Q96FT9 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
IFT43Q96FT9 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
IFT43Q96FT9 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
IFT43Q96FT9 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
IFT43Q96FT9 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
IFT43Q96FT9 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
IFT43Q96FT9 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
IFT43Q96FT9 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC16.06■□□□□ 0.16
IFT43Q96FT9 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
IFT43Q96FT9 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
IFT43Q96FT9 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC16.06■□□□□ 0.16
IFT43Q96FT9 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
IFT43Q96FT9 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC16.06■□□□□ 0.16
IFT43Q96FT9 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC16.06■□□□□ 0.16
IFT43Q96FT9 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
IFT43Q96FT9 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC16.06■□□□□ 0.16
IFT43Q96FT9 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
IFT43Q96FT9 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
IFT43Q96FT9 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
IFT43Q96FT9 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC16.06■□□□□ 0.16
IFT43Q96FT9 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC16.06■□□□□ 0.16
IFT43Q96FT9 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
IFT43Q96FT9 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
IFT43Q96FT9 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
IFT43Q96FT9 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC16.06■□□□□ 0.16
IFT43Q96FT9 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
IFT43Q96FT9 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
IFT43Q96FT9 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
IFT43Q96FT9 AL080243.2-201ENST00000418783 582 ntBASIC16.06■□□□□ 0.16
IFT43Q96FT9 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC16.06■□□□□ 0.16
IFT43Q96FT9 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC16.06■□□□□ 0.16
IFT43Q96FT9 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
IFT43Q96FT9 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC16.06■□□□□ 0.16
IFT43Q96FT9 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
IFT43Q96FT9 AC025048.6-201ENST00000634326 1161 ntBASIC16.06■□□□□ 0.16
IFT43Q96FT9 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
IFT43Q96FT9 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
IFT43Q96FT9 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC16.06■□□□□ 0.16
IFT43Q96FT9 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
IFT43Q96FT9 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
IFT43Q96FT9 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
IFT43Q96FT9 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
IFT43Q96FT9 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
IFT43Q96FT9 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
IFT43Q96FT9 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
IFT43Q96FT9 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC16.06■□□□□ 0.16
IFT43Q96FT9 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
IFT43Q96FT9 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
IFT43Q96FT9 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
IFT43Q96FT9 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
IFT43Q96FT9 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
IFT43Q96FT9 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
IFT43Q96FT9 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC16.05■□□□□ 0.16
IFT43Q96FT9 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
IFT43Q96FT9 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
IFT43Q96FT9 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC16.05■□□□□ 0.16
IFT43Q96FT9 WARS-232ENST00000556645 2508 ntTSL 5 BASIC16.05■□□□□ 0.16
IFT43Q96FT9 PPT1-215ENST00000641471 2368 ntBASIC16.05■□□□□ 0.16
IFT43Q96FT9 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
IFT43Q96FT9 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
IFT43Q96FT9 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
IFT43Q96FT9 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
IFT43Q96FT9 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
IFT43Q96FT9 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
IFT43Q96FT9 CENPM-206ENST00000407253 818 ntTSL 2 BASIC16.05■□□□□ 0.16
IFT43Q96FT9 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
IFT43Q96FT9 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC16.05■□□□□ 0.16
IFT43Q96FT9 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC16.05■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms