Protein–RNA interactions for Protein: Q8WWF3

SSMEM1, Serine-rich single-pass membrane protein 1, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSMEM1Q8WWF3 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
SSMEM1Q8WWF3 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
SSMEM1Q8WWF3 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SSMEM1Q8WWF3 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
SSMEM1Q8WWF3 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SSMEM1Q8WWF3 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
SSMEM1Q8WWF3 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
SSMEM1Q8WWF3 GK-202ENST00000378941 458 ntTSL 3 BASIC12.95□□□□□ -0.34
SSMEM1Q8WWF3 MIR648-201ENST00000385046 94 ntBASIC12.95□□□□□ -0.34
SSMEM1Q8WWF3 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
SSMEM1Q8WWF3 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC12.95□□□□□ -0.34
SSMEM1Q8WWF3 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SSMEM1Q8WWF3 GSAP-205ENST00000430584 600 ntTSL 5 BASIC12.95□□□□□ -0.34
SSMEM1Q8WWF3 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC12.95□□□□□ -0.34
SSMEM1Q8WWF3 AC114501.2-201ENST00000439631 535 ntBASIC12.95□□□□□ -0.34
SSMEM1Q8WWF3 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC12.95□□□□□ -0.34
SSMEM1Q8WWF3 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
SSMEM1Q8WWF3 PUDP-206ENST00000540122 825 ntTSL 2 BASIC12.95□□□□□ -0.34
SSMEM1Q8WWF3 AC044860.1-202ENST00000559481 777 ntBASIC12.95□□□□□ -0.34
SSMEM1Q8WWF3 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC12.95□□□□□ -0.34
SSMEM1Q8WWF3 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC12.95□□□□□ -0.34
SSMEM1Q8WWF3 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC12.95□□□□□ -0.34
SSMEM1Q8WWF3 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
SSMEM1Q8WWF3 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
SSMEM1Q8WWF3 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SSMEM1Q8WWF3 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SSMEM1Q8WWF3 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
SSMEM1Q8WWF3 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
SSMEM1Q8WWF3 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC12.95□□□□□ -0.34
SSMEM1Q8WWF3 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
SSMEM1Q8WWF3 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
SSMEM1Q8WWF3 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SSMEM1Q8WWF3 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC12.95□□□□□ -0.34
SSMEM1Q8WWF3 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SSMEM1Q8WWF3 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SSMEM1Q8WWF3 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SSMEM1Q8WWF3 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
SSMEM1Q8WWF3 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SSMEM1Q8WWF3 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
SSMEM1Q8WWF3 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SSMEM1Q8WWF3 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC12.94□□□□□ -0.34
SSMEM1Q8WWF3 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SSMEM1Q8WWF3 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC12.94□□□□□ -0.34
SSMEM1Q8WWF3 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC12.94□□□□□ -0.34
SSMEM1Q8WWF3 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SSMEM1Q8WWF3 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SSMEM1Q8WWF3 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
SSMEM1Q8WWF3 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SSMEM1Q8WWF3 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC12.94□□□□□ -0.34
SSMEM1Q8WWF3 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC12.94□□□□□ -0.34
SSMEM1Q8WWF3 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
SSMEM1Q8WWF3 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SSMEM1Q8WWF3 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
SSMEM1Q8WWF3 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
SSMEM1Q8WWF3 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
SSMEM1Q8WWF3 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC12.94□□□□□ -0.34
SSMEM1Q8WWF3 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SSMEM1Q8WWF3 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
SSMEM1Q8WWF3 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
SSMEM1Q8WWF3 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SSMEM1Q8WWF3 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC12.94□□□□□ -0.34
SSMEM1Q8WWF3 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
SSMEM1Q8WWF3 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
SSMEM1Q8WWF3 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC12.94□□□□□ -0.34
SSMEM1Q8WWF3 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC12.94□□□□□ -0.34
SSMEM1Q8WWF3 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC12.94□□□□□ -0.34
SSMEM1Q8WWF3 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC12.94□□□□□ -0.34
SSMEM1Q8WWF3 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC12.94□□□□□ -0.34
SSMEM1Q8WWF3 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
SSMEM1Q8WWF3 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC12.94□□□□□ -0.34
SSMEM1Q8WWF3 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SSMEM1Q8WWF3 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC12.94□□□□□ -0.34
SSMEM1Q8WWF3 5S_rRNA.22-201ENST00000614916 106 ntBASIC12.94□□□□□ -0.34
SSMEM1Q8WWF3 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC12.94□□□□□ -0.34
SSMEM1Q8WWF3 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
SSMEM1Q8WWF3 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SSMEM1Q8WWF3 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SSMEM1Q8WWF3 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
SSMEM1Q8WWF3 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
SSMEM1Q8WWF3 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SSMEM1Q8WWF3 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
SSMEM1Q8WWF3 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC12.94□□□□□ -0.34
SSMEM1Q8WWF3 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC12.94□□□□□ -0.34
SSMEM1Q8WWF3 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
SSMEM1Q8WWF3 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC12.94□□□□□ -0.34
SSMEM1Q8WWF3 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC12.94□□□□□ -0.34
SSMEM1Q8WWF3 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
SSMEM1Q8WWF3 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
SSMEM1Q8WWF3 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
SSMEM1Q8WWF3 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SSMEM1Q8WWF3 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
SSMEM1Q8WWF3 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
SSMEM1Q8WWF3 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SSMEM1Q8WWF3 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC12.93□□□□□ -0.34
SSMEM1Q8WWF3 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC12.93□□□□□ -0.34
SSMEM1Q8WWF3 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
SSMEM1Q8WWF3 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
SSMEM1Q8WWF3 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
SSMEM1Q8WWF3 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
SSMEM1Q8WWF3 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms