Protein–RNA interactions for Protein: Q8TDI0

CHD5, Chromodomain-helicase-DNA-binding protein 5, humanhuman

Predictions only

Length 1,954 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD5Q8TDI0 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC15.51■□□□□ 0.07
CHD5Q8TDI0 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CHD5Q8TDI0 GPR53P-205ENST00000457298 1084 ntBASIC15.51■□□□□ 0.07
CHD5Q8TDI0 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CHD5Q8TDI0 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC15.51■□□□□ 0.07
CHD5Q8TDI0 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC15.51■□□□□ 0.07
CHD5Q8TDI0 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC15.51■□□□□ 0.07
CHD5Q8TDI0 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CHD5Q8TDI0 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CHD5Q8TDI0 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CHD5Q8TDI0 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
CHD5Q8TDI0 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC15.51■□□□□ 0.07
CHD5Q8TDI0 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC15.51■□□□□ 0.07
CHD5Q8TDI0 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC15.51■□□□□ 0.07
CHD5Q8TDI0 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC15.5■□□□□ 0.07
CHD5Q8TDI0 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
CHD5Q8TDI0 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CHD5Q8TDI0 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CHD5Q8TDI0 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
CHD5Q8TDI0 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
CHD5Q8TDI0 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
CHD5Q8TDI0 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC15.5■□□□□ 0.07
CHD5Q8TDI0 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
CHD5Q8TDI0 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CHD5Q8TDI0 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC15.5■□□□□ 0.07
CHD5Q8TDI0 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
CHD5Q8TDI0 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CHD5Q8TDI0 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CHD5Q8TDI0 LBX2-201ENST00000341396 886 ntTSL 3 BASIC15.5■□□□□ 0.07
CHD5Q8TDI0 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
CHD5Q8TDI0 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC15.5■□□□□ 0.07
CHD5Q8TDI0 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
CHD5Q8TDI0 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC15.5■□□□□ 0.07
CHD5Q8TDI0 CSF2RBP1-201ENST00000447905 391 ntBASIC15.5■□□□□ 0.07
CHD5Q8TDI0 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC15.5■□□□□ 0.07
CHD5Q8TDI0 DUX4L45-201ENST00000566406 1057 ntBASIC15.5■□□□□ 0.07
CHD5Q8TDI0 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
CHD5Q8TDI0 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC15.5■□□□□ 0.07
CHD5Q8TDI0 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC15.5■□□□□ 0.07
CHD5Q8TDI0 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC15.5■□□□□ 0.07
CHD5Q8TDI0 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC15.5■□□□□ 0.07
CHD5Q8TDI0 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC15.5■□□□□ 0.07
CHD5Q8TDI0 REXO1L5P-201ENST00000622260 2098 ntBASIC15.5■□□□□ 0.07
CHD5Q8TDI0 GSN-215ENST00000545652 2428 ntTSL 2 BASIC15.5■□□□□ 0.07
CHD5Q8TDI0 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CHD5Q8TDI0 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CHD5Q8TDI0 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CHD5Q8TDI0 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CHD5Q8TDI0 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CHD5Q8TDI0 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CHD5Q8TDI0 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC15.5■□□□□ 0.07
CHD5Q8TDI0 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC15.49■□□□□ 0.07
CHD5Q8TDI0 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CHD5Q8TDI0 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CHD5Q8TDI0 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
CHD5Q8TDI0 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
CHD5Q8TDI0 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC15.49■□□□□ 0.07
CHD5Q8TDI0 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
CHD5Q8TDI0 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC15.49■□□□□ 0.07
CHD5Q8TDI0 ATP5G2P4-201ENST00000442175 420 ntBASIC15.49■□□□□ 0.07
CHD5Q8TDI0 AC114812.1-204ENST00000449669 728 ntBASIC15.49■□□□□ 0.07
CHD5Q8TDI0 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC15.49■□□□□ 0.07
CHD5Q8TDI0 RAB43P1-201ENST00000561790 589 ntBASIC15.49■□□□□ 0.07
CHD5Q8TDI0 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC15.49■□□□□ 0.07
CHD5Q8TDI0 AC073413.1-201ENST00000603927 732 ntBASIC15.49■□□□□ 0.07
CHD5Q8TDI0 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC15.49■□□□□ 0.07
CHD5Q8TDI0 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CHD5Q8TDI0 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC15.49■□□□□ 0.07
CHD5Q8TDI0 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CHD5Q8TDI0 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CHD5Q8TDI0 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CHD5Q8TDI0 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CHD5Q8TDI0 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CHD5Q8TDI0 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC15.49■□□□□ 0.07
CHD5Q8TDI0 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CHD5Q8TDI0 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC15.49■□□□□ 0.07
CHD5Q8TDI0 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CHD5Q8TDI0 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC15.49■□□□□ 0.07
CHD5Q8TDI0 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC15.49■□□□□ 0.07
CHD5Q8TDI0 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC15.49■□□□□ 0.07
CHD5Q8TDI0 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CHD5Q8TDI0 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
CHD5Q8TDI0 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CHD5Q8TDI0 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
CHD5Q8TDI0 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CHD5Q8TDI0 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
CHD5Q8TDI0 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC15.49■□□□□ 0.07
CHD5Q8TDI0 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC15.49■□□□□ 0.07
CHD5Q8TDI0 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CHD5Q8TDI0 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CHD5Q8TDI0 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CHD5Q8TDI0 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
CHD5Q8TDI0 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC15.49■□□□□ 0.07
CHD5Q8TDI0 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CHD5Q8TDI0 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC15.49■□□□□ 0.07
CHD5Q8TDI0 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CHD5Q8TDI0 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC15.49■□□□□ 0.07
CHD5Q8TDI0 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC15.49■□□□□ 0.07
CHD5Q8TDI0 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
CHD5Q8TDI0 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC15.49■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 100.8 ms