Protein–RNA interactions for Protein: Q8IWV7

UBR1, E3 ubiquitin-protein ligase UBR1, humanhuman

Predictions only

Length 1,749 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1Q8IWV7 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
UBR1Q8IWV7 CICP12-201ENST00000455801 843 ntBASIC21.38■■□□□ 1.01
UBR1Q8IWV7 SNCB-203ENST00000506696 552 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
UBR1Q8IWV7 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC21.38■■□□□ 1.01
UBR1Q8IWV7 AC011500.3-201ENST00000594676 647 ntTSL 4 BASIC21.38■■□□□ 1.01
UBR1Q8IWV7 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC21.38■■□□□ 1.01
UBR1Q8IWV7 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC21.38■■□□□ 1.01
UBR1Q8IWV7 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
UBR1Q8IWV7 PPP1R1B-202ENST00000394265 1419 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
UBR1Q8IWV7 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
UBR1Q8IWV7 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
UBR1Q8IWV7 TEX264-201ENST00000341333 1340 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
UBR1Q8IWV7 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
UBR1Q8IWV7 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC21.38■■□□□ 1.01
UBR1Q8IWV7 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
UBR1Q8IWV7 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
UBR1Q8IWV7 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
UBR1Q8IWV7 PCNA-202ENST00000379160 1359 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
UBR1Q8IWV7 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
UBR1Q8IWV7 CA12-203ENST00000422263 2556 ntTSL 2 BASIC21.38■■□□□ 1.01
UBR1Q8IWV7 SLC13A3-205ENST00000417157 876 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
UBR1Q8IWV7 TLE1P1-201ENST00000422965 589 ntBASIC21.38■■□□□ 1.01
UBR1Q8IWV7 MPC1L-201ENST00000423387 571 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
UBR1Q8IWV7 LAMA4-208ENST00000431543 1080 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
UBR1Q8IWV7 XBP1P1-201ENST00000436573 652 ntBASIC21.38■■□□□ 1.01
UBR1Q8IWV7 SKA2-202ENST00000437036 625 ntTSL 2 BASIC21.38■■□□□ 1.01
UBR1Q8IWV7 AL157788.1-201ENST00000437838 229 ntTSL 3 BASIC21.38■■□□□ 1.01
UBR1Q8IWV7 MEF2C-AS2-201ENST00000510274 463 ntTSL 5 BASIC21.38■■□□□ 1.01
UBR1Q8IWV7 AC129102.1-201ENST00000535755 525 ntTSL 4 BASIC21.38■■□□□ 1.01
UBR1Q8IWV7 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
UBR1Q8IWV7 LINC01224-201ENST00000593573 798 ntTSL 4 BASIC21.38■■□□□ 1.01
UBR1Q8IWV7 LINC00923-205ENST00000615399 932 ntTSL 5 BASIC21.38■■□□□ 1.01
UBR1Q8IWV7 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
UBR1Q8IWV7 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC21.38■■□□□ 1.01
UBR1Q8IWV7 ENO3-202ENST00000518175 1448 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
UBR1Q8IWV7 AC144522.1-201ENST00000625111 1658 ntBASIC21.37■■□□□ 1.01
UBR1Q8IWV7 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
UBR1Q8IWV7 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
UBR1Q8IWV7 FAM69C-202ENST00000400291 1329 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
UBR1Q8IWV7 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
UBR1Q8IWV7 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
UBR1Q8IWV7 RAN-210ENST00000541630 1475 ntTSL 2 BASIC21.37■■□□□ 1.01
UBR1Q8IWV7 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
UBR1Q8IWV7 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
UBR1Q8IWV7 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC21.37■■□□□ 1.01
UBR1Q8IWV7 C16orf45-209ENST00000566490 1854 ntTSL 5 BASIC21.37■■□□□ 1.01
UBR1Q8IWV7 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC21.37■■□□□ 1.01
UBR1Q8IWV7 CHCHD7-202ENST00000355315 1535 ntTSL 2 BASIC21.37■■□□□ 1.01
UBR1Q8IWV7 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC21.37■■□□□ 1.01
UBR1Q8IWV7 RPS9-204ENST00000391753 709 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
UBR1Q8IWV7 AC005392.1-201ENST00000419624 500 ntTSL 5 BASIC21.37■■□□□ 1.01
UBR1Q8IWV7 AL139420.2-201ENST00000449439 410 ntTSL 3 BASIC21.37■■□□□ 1.01
UBR1Q8IWV7 NSD1-211ENST00000511258 809 ntTSL 3 BASIC21.37■■□□□ 1.01
UBR1Q8IWV7 C12orf10-207ENST00000549488 840 ntTSL 5 BASIC21.37■■□□□ 1.01
UBR1Q8IWV7 AL132709.1-203ENST00000555103 569 ntTSL 4 BASIC21.37■■□□□ 1.01
UBR1Q8IWV7 AC008758.6-201ENST00000598753 588 ntAPPRIS P1 TSL 4 BASIC21.37■■□□□ 1.01
UBR1Q8IWV7 HIST1H4I-201ENST00000615353 1294 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
UBR1Q8IWV7 PRKAB1-210ENST00000630317 258 ntTSL 2 BASIC21.37■■□□□ 1.01
UBR1Q8IWV7 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
UBR1Q8IWV7 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC21.37■■□□□ 1.01
UBR1Q8IWV7 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC21.37■■□□□ 1.01
UBR1Q8IWV7 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
UBR1Q8IWV7 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
UBR1Q8IWV7 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
UBR1Q8IWV7 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC21.37■■□□□ 1.01
UBR1Q8IWV7 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC21.37■■□□□ 1.01
UBR1Q8IWV7 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
UBR1Q8IWV7 LINC00513-201ENST00000447430 1616 ntTSL 5 BASIC21.36■■□□□ 1.01
UBR1Q8IWV7 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC21.36■■□□□ 1.01
UBR1Q8IWV7 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC21.36■■□□□ 1.01
UBR1Q8IWV7 FRMD6-AS1-201ENST00000617151 2229 ntBASIC21.36■■□□□ 1.01
UBR1Q8IWV7 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
UBR1Q8IWV7 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
UBR1Q8IWV7 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
UBR1Q8IWV7 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC21.36■■□□□ 1.01
UBR1Q8IWV7 AL590093.1-201ENST00000416119 623 ntTSL 5 BASIC21.36■■□□□ 1.01
UBR1Q8IWV7 LINC00441-201ENST00000433480 1143 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
UBR1Q8IWV7 BUD31-205ENST00000456893 512 ntTSL 5 BASIC21.36■■□□□ 1.01
UBR1Q8IWV7 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC21.36■■□□□ 1.01
UBR1Q8IWV7 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC21.36■■□□□ 1.01
UBR1Q8IWV7 CYB561D1-207ENST00000527072 892 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
UBR1Q8IWV7 ZNF124-206ENST00000543802 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
UBR1Q8IWV7 PPCDC-205ENST00000563393 1149 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
UBR1Q8IWV7 PPCDC-208ENST00000567336 892 ntTSL 5 BASIC21.36■■□□□ 1.01
UBR1Q8IWV7 AC092299.1-201ENST00000632679 757 ntBASIC21.36■■□□□ 1.01
UBR1Q8IWV7 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
UBR1Q8IWV7 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC21.36■■□□□ 1.01
UBR1Q8IWV7 SUPT4H1-201ENST00000225504 1489 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
UBR1Q8IWV7 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
UBR1Q8IWV7 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC21.36■■□□□ 1.01
UBR1Q8IWV7 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
UBR1Q8IWV7 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
UBR1Q8IWV7 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
UBR1Q8IWV7 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
UBR1Q8IWV7 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
UBR1Q8IWV7 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
UBR1Q8IWV7 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC21.35■■□□□ 1.01
UBR1Q8IWV7 MAGOH-202ENST00000371470 756 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
UBR1Q8IWV7 NACA-202ENST00000393891 1059 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
UBR1Q8IWV7 CRYBB3-202ENST00000404334 601 ntTSL 3 BASIC21.35■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 54.6 ms